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GROMACS 5.0.1, nVidia CUDA Toolkit, And FFTW3 Under Ubuntu 14.04 LTS (64-bit); The Virtues Of VirtualBox

September 22nd, 2014

Summarized below are the catches and fixes from a recent effort to build GROMACS 5.0.1 with FFTW3 (single- and double-precision) and GPU support (so, single-precision). Also, a trick I’ve been doing with great success lately, using a virtual machine to keep my real machine as clean as possible. 0. The Virtues Of VirtualBox Open source […]

Compiling And Running GAMESS-US (1 May 2013(R1)) On 64-bit Ubuntu 12.X/13.X In SMP Mode

April 5th, 2014

Author’s Note 1: It is my standard policy to put too much info into guides so that those who are searching for specific problems they come across will find the offending text in their searches. With luck, your “build error” search sent you here. Author’s Note 2: It’s not as bad as it looks (I’ve […]

CudaMiner Installation In Ubuntu 12.04 LTS Using CUDA Toolkit 5.5 And “Additional NVIDIA Drivers”

December 28th, 2013

Author’s Note 1: It is my standard policy to put too much info into guides so that those who are searching for specific problems they come across will find the offending text in their searches. With luck, your “build error” search sent you here. Author’s Note 2: It’s not as bad as it looks (I’ve […]

Compiling LAMMPS (3Apr13, But Likely Others) In Ubuntu 10.04 Part 1. Using MPICH2 And FFTW2 (And Ubuntu Notes On Installing Intel Fortran And C++ Composers XE for Linux)

April 6th, 2013

I’ll qualify this post by saying that (1) I have given up on Ubuntu 11.x and 12.x because they are consistently unstable on my hardware (so, if you have issues running this installation on those versions, I may not be of much help (although I suspect things should work)), (2) I am starting this install […]

Brief Update: Amber 11 And AmberTools 1.5 In Ubuntu 12.04 LTS

June 30th, 2012

This post is a brief update to a much longer and more involved discussion of Amber 11 and AmberTools installation in Ubuntu 10.04 LTS (Lucid Lynx) (as the changes are minor and the parallelization setup remains largely the same). You can find this more involved discussion at www.somewhereville.com/?p=1422. Long/Short – the installation under Ubuntu 12.04 […]

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  • Salt City Miners

  • Ubuntu 4 Nano

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  • N-Fact. Collab.

  • T R P Nanosys

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    Syracuse Scenes

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