Making all in include
Making all in .
make[2]: Nothing to be done for `all-am'.
Making all in types
make[2]: Nothing to be done for `all'.
Making all in thread_mpi
Making all in atomic
make[3]: Nothing to be done for `all'.
make[3]: Nothing to be done for `all-am'.
Making all in src
make  all-recursive
Making all in gmxlib
Making all in nonbonded
Making all in nb_kernel_x86_64_sse
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel010_x86_64_sse.lo nb_kernel010_x86_64_sse.s
mkdir .libs
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel010_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel010_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel010_x86_64_sse.s -o nb_kernel010_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel030_x86_64_sse.lo nb_kernel030_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel030_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel030_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel030_x86_64_sse.s -o nb_kernel030_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel100_x86_64_sse.lo nb_kernel100_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel100_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel100_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel100_x86_64_sse.s -o nb_kernel100_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel101_x86_64_sse.lo nb_kernel101_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel101_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel101_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel101_x86_64_sse.s -o nb_kernel101_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel102_x86_64_sse.lo nb_kernel102_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel102_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel102_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel102_x86_64_sse.s -o nb_kernel102_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel103_x86_64_sse.lo nb_kernel103_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel103_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel103_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel103_x86_64_sse.s -o nb_kernel103_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel104_x86_64_sse.lo nb_kernel104_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel104_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel104_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel104_x86_64_sse.s -o nb_kernel104_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel110_x86_64_sse.lo nb_kernel110_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel110_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel110_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel110_x86_64_sse.s -o nb_kernel110_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel111_x86_64_sse.lo nb_kernel111_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel111_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel111_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel111_x86_64_sse.s -o nb_kernel111_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel112_x86_64_sse.lo nb_kernel112_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel112_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel112_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel112_x86_64_sse.s -o nb_kernel112_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel113_x86_64_sse.lo nb_kernel113_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel113_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel113_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel113_x86_64_sse.s -o nb_kernel113_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel114_x86_64_sse.lo nb_kernel114_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel114_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel114_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel114_x86_64_sse.s -o nb_kernel114_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel130_x86_64_sse.lo nb_kernel130_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel130_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel130_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel130_x86_64_sse.s -o nb_kernel130_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel131_x86_64_sse.lo nb_kernel131_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel131_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel131_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel131_x86_64_sse.s -o nb_kernel131_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel132_x86_64_sse.lo nb_kernel132_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel132_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel132_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel132_x86_64_sse.s -o nb_kernel132_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel133_x86_64_sse.lo nb_kernel133_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel133_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel133_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel133_x86_64_sse.s -o nb_kernel133_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel134_x86_64_sse.lo nb_kernel134_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel134_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel134_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel134_x86_64_sse.s -o nb_kernel134_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel200_x86_64_sse.lo nb_kernel200_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel200_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel200_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel200_x86_64_sse.s -o nb_kernel200_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel201_x86_64_sse.lo nb_kernel201_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel201_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel201_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel201_x86_64_sse.s -o nb_kernel201_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel202_x86_64_sse.lo nb_kernel202_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel202_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel202_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel202_x86_64_sse.s -o nb_kernel202_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel203_x86_64_sse.lo nb_kernel203_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel203_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel203_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel203_x86_64_sse.s -o nb_kernel203_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel204_x86_64_sse.lo nb_kernel204_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel204_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel204_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel204_x86_64_sse.s -o nb_kernel204_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel210_x86_64_sse.lo nb_kernel210_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel210_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel210_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel210_x86_64_sse.s -o nb_kernel210_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel211_x86_64_sse.lo nb_kernel211_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel211_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel211_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel211_x86_64_sse.s -o nb_kernel211_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel212_x86_64_sse.lo nb_kernel212_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel212_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel212_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel212_x86_64_sse.s -o nb_kernel212_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel213_x86_64_sse.lo nb_kernel213_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel213_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel213_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel213_x86_64_sse.s -o nb_kernel213_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel214_x86_64_sse.lo nb_kernel214_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel214_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel214_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel214_x86_64_sse.s -o nb_kernel214_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel230_x86_64_sse.lo nb_kernel230_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel230_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel230_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel230_x86_64_sse.s -o nb_kernel230_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel231_x86_64_sse.lo nb_kernel231_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel231_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel231_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel231_x86_64_sse.s -o nb_kernel231_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel232_x86_64_sse.lo nb_kernel232_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel232_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel232_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel232_x86_64_sse.s -o nb_kernel232_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel233_x86_64_sse.lo nb_kernel233_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel233_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel233_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel233_x86_64_sse.s -o nb_kernel233_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel234_x86_64_sse.lo nb_kernel234_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel234_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel234_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel234_x86_64_sse.s -o nb_kernel234_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel300_x86_64_sse.lo nb_kernel300_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel300_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel300_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel300_x86_64_sse.s -o nb_kernel300_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel301_x86_64_sse.lo nb_kernel301_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel301_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel301_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel301_x86_64_sse.s -o nb_kernel301_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel302_x86_64_sse.lo nb_kernel302_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel302_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel302_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel302_x86_64_sse.s -o nb_kernel302_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel303_x86_64_sse.lo nb_kernel303_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel303_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel303_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel303_x86_64_sse.s -o nb_kernel303_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel304_x86_64_sse.lo nb_kernel304_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel304_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel304_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel304_x86_64_sse.s -o nb_kernel304_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel310_x86_64_sse.lo nb_kernel310_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel310_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel310_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel310_x86_64_sse.s -o nb_kernel310_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel311_x86_64_sse.lo nb_kernel311_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel311_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel311_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel311_x86_64_sse.s -o nb_kernel311_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel312_x86_64_sse.lo nb_kernel312_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel312_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel312_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel312_x86_64_sse.s -o nb_kernel312_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel313_x86_64_sse.lo nb_kernel313_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel313_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel313_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel313_x86_64_sse.s -o nb_kernel313_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel314_x86_64_sse.lo nb_kernel314_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel314_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel314_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel314_x86_64_sse.s -o nb_kernel314_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel330_x86_64_sse.lo nb_kernel330_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel330_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel330_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel330_x86_64_sse.s -o nb_kernel330_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel331_x86_64_sse.lo nb_kernel331_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel331_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel331_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel331_x86_64_sse.s -o nb_kernel331_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel332_x86_64_sse.lo nb_kernel332_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel332_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel332_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel332_x86_64_sse.s -o nb_kernel332_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel333_x86_64_sse.lo nb_kernel333_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel333_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel333_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel333_x86_64_sse.s -o nb_kernel333_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel334_x86_64_sse.lo nb_kernel334_x86_64_sse.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel334_x86_64_sse.s  -fno-common -DPIC -o .libs/nb_kernel334_x86_64_sse.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel334_x86_64_sse.s -o nb_kernel334_x86_64_sse.o >/dev/null 2>&1
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo -c -o nb_kernel400_x86_64_sse.lo nb_kernel400_x86_64_sse.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo -c nb_kernel400_x86_64_sse.c  -fno-common -DPIC -o .libs/nb_kernel400_x86_64_sse.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse.Tpo -c nb_kernel400_x86_64_sse.c -o nb_kernel400_x86_64_sse.o >/dev/null 2>&1
mv -f .deps/nb_kernel400_x86_64_sse.Tpo .deps/nb_kernel400_x86_64_sse.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse.Tpo -c -o nb_kernel410_x86_64_sse.lo nb_kernel410_x86_64_sse.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse.Tpo -c nb_kernel410_x86_64_sse.c  -fno-common -DPIC -o .libs/nb_kernel410_x86_64_sse.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse.Tpo -c nb_kernel410_x86_64_sse.c -o nb_kernel410_x86_64_sse.o >/dev/null 2>&1
mv -f .deps/nb_kernel410_x86_64_sse.Tpo .deps/nb_kernel410_x86_64_sse.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel430_x86_64_sse.Tpo -c -o nb_kernel430_x86_64_sse.lo nb_kernel430_x86_64_sse.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel430_x86_64_sse.Tpo -c nb_kernel430_x86_64_sse.c  -fno-common -DPIC -o .libs/nb_kernel430_x86_64_sse.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel430_x86_64_sse.Tpo -c nb_kernel430_x86_64_sse.c -o nb_kernel430_x86_64_sse.o >/dev/null 2>&1
mv -f .deps/nb_kernel430_x86_64_sse.Tpo .deps/nb_kernel430_x86_64_sse.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse.Tpo -c -o nb_kernel_x86_64_sse.lo nb_kernel_x86_64_sse.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse.Tpo -c nb_kernel_x86_64_sse.c  -fno-common -DPIC -o .libs/nb_kernel_x86_64_sse.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_x86_64_sse.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse.Tpo -c nb_kernel_x86_64_sse.c -o nb_kernel_x86_64_sse.o >/dev/null 2>&1
mv -f .deps/nb_kernel_x86_64_sse.Tpo .deps/nb_kernel_x86_64_sse.Plo
/bin/sh ../../../../libtool   --mode=compile mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c -o nb_kernel_x86_64_sse_test_asm.lo nb_kernel_x86_64_sse_test_asm.s
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel_x86_64_sse_test_asm.s  -fno-common -DPIC -o .libs/nb_kernel_x86_64_sse_test_asm.o
 mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -c nb_kernel_x86_64_sse_test_asm.s -o nb_kernel_x86_64_sse_test_asm.o >/dev/null 2>&1
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_single.Tpo -c -o nb_kernel_allvsall_sse2_single.lo nb_kernel_allvsall_sse2_single.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_single.Tpo -c nb_kernel_allvsall_sse2_single.c  -fno-common -DPIC -o .libs/nb_kernel_allvsall_sse2_single.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_single.Tpo -c nb_kernel_allvsall_sse2_single.c -o nb_kernel_allvsall_sse2_single.o >/dev/null 2>&1
mv -f .deps/nb_kernel_allvsall_sse2_single.Tpo .deps/nb_kernel_allvsall_sse2_single.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_single.Tpo -c -o nb_kernel_allvsallgb_sse2_single.lo nb_kernel_allvsallgb_sse2_single.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_single.Tpo -c nb_kernel_allvsallgb_sse2_single.c  -fno-common -DPIC -o .libs/nb_kernel_allvsallgb_sse2_single.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb_sse2_single.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_single.Tpo -c nb_kernel_allvsallgb_sse2_single.c -o nb_kernel_allvsallgb_sse2_single.o >/dev/null 2>&1
mv -f .deps/nb_kernel_allvsallgb_sse2_single.Tpo .deps/nb_kernel_allvsallgb_sse2_single.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libnb_kernel_x86_64_sse.la  nb_kernel010_x86_64_sse.lo nb_kernel030_x86_64_sse.lo nb_kernel100_x86_64_sse.lo nb_kernel101_x86_64_sse.lo nb_kernel102_x86_64_sse.lo nb_kernel103_x86_64_sse.lo nb_kernel104_x86_64_sse.lo nb_kernel110_x86_64_sse.lo nb_kernel111_x86_64_sse.lo nb_kernel112_x86_64_sse.lo nb_kernel113_x86_64_sse.lo nb_kernel114_x86_64_sse.lo nb_kernel130_x86_64_sse.lo nb_kernel131_x86_64_sse.lo nb_kernel132_x86_64_sse.lo nb_kernel133_x86_64_sse.lo nb_kernel134_x86_64_sse.lo nb_kernel200_x86_64_sse.lo nb_kernel201_x86_64_sse.lo nb_kernel202_x86_64_sse.lo nb_kernel203_x86_64_sse.lo nb_kernel204_x86_64_sse.lo nb_kernel210_x86_64_sse.lo nb_kernel211_x86_64_sse.lo nb_kernel212_x86_64_sse.lo nb_kernel213_x86_64_sse.lo nb_kernel214_x86_64_sse.lo nb_kernel230_x86_64_sse.lo nb_kernel231_x86_64_sse.lo nb_kernel232_x86_64_sse.lo nb_kernel233_x86_64_sse.lo nb_kernel234_x86_64_sse.lo nb_kernel300_x86_64_sse.lo nb_kernel301_x86_64_sse.lo nb_kernel302_x86_64_sse.lo nb_kernel303_x86_64_sse.lo nb_kernel304_x86_64_sse.lo nb_kernel310_x86_64_sse.lo nb_kernel311_x86_64_sse.lo nb_kernel312_x86_64_sse.lo nb_kernel313_x86_64_sse.lo nb_kernel314_x86_64_sse.lo nb_kernel330_x86_64_sse.lo nb_kernel331_x86_64_sse.lo nb_kernel332_x86_64_sse.lo nb_kernel333_x86_64_sse.lo nb_kernel334_x86_64_sse.lo nb_kernel400_x86_64_sse.lo nb_kernel410_x86_64_sse.lo nb_kernel430_x86_64_sse.lo nb_kernel_x86_64_sse.lo nb_kernel_x86_64_sse_test_asm.lo nb_kernel_allvsall_sse2_single.lo nb_kernel_allvsallgb_sse2_single.lo  -lm  
ar cru .libs/libnb_kernel_x86_64_sse.a .libs/nb_kernel010_x86_64_sse.o .libs/nb_kernel030_x86_64_sse.o .libs/nb_kernel100_x86_64_sse.o .libs/nb_kernel101_x86_64_sse.o .libs/nb_kernel102_x86_64_sse.o .libs/nb_kernel103_x86_64_sse.o .libs/nb_kernel104_x86_64_sse.o .libs/nb_kernel110_x86_64_sse.o .libs/nb_kernel111_x86_64_sse.o .libs/nb_kernel112_x86_64_sse.o .libs/nb_kernel113_x86_64_sse.o .libs/nb_kernel114_x86_64_sse.o .libs/nb_kernel130_x86_64_sse.o .libs/nb_kernel131_x86_64_sse.o .libs/nb_kernel132_x86_64_sse.o .libs/nb_kernel133_x86_64_sse.o .libs/nb_kernel134_x86_64_sse.o .libs/nb_kernel200_x86_64_sse.o .libs/nb_kernel201_x86_64_sse.o .libs/nb_kernel202_x86_64_sse.o .libs/nb_kernel203_x86_64_sse.o .libs/nb_kernel204_x86_64_sse.o .libs/nb_kernel210_x86_64_sse.o .libs/nb_kernel211_x86_64_sse.o .libs/nb_kernel212_x86_64_sse.o .libs/nb_kernel213_x86_64_sse.o .libs/nb_kernel214_x86_64_sse.o .libs/nb_kernel230_x86_64_sse.o .libs/nb_kernel231_x86_64_sse.o .libs/nb_kernel232_x86_64_sse.o .libs/nb_kernel233_x86_64_sse.o .libs/nb_kernel234_x86_64_sse.o .libs/nb_kernel300_x86_64_sse.o .libs/nb_kernel301_x86_64_sse.o .libs/nb_kernel302_x86_64_sse.o .libs/nb_kernel303_x86_64_sse.o .libs/nb_kernel304_x86_64_sse.o .libs/nb_kernel310_x86_64_sse.o .libs/nb_kernel311_x86_64_sse.o .libs/nb_kernel312_x86_64_sse.o .libs/nb_kernel313_x86_64_sse.o .libs/nb_kernel314_x86_64_sse.o .libs/nb_kernel330_x86_64_sse.o .libs/nb_kernel331_x86_64_sse.o .libs/nb_kernel332_x86_64_sse.o .libs/nb_kernel333_x86_64_sse.o .libs/nb_kernel334_x86_64_sse.o .libs/nb_kernel400_x86_64_sse.o .libs/nb_kernel410_x86_64_sse.o .libs/nb_kernel430_x86_64_sse.o .libs/nb_kernel_x86_64_sse.o .libs/nb_kernel_x86_64_sse_test_asm.o .libs/nb_kernel_allvsall_sse2_single.o .libs/nb_kernel_allvsallgb_sse2_single.o
ranlib .libs/libnb_kernel_x86_64_sse.a
creating libnb_kernel_x86_64_sse.la
(cd .libs && rm -f libnb_kernel_x86_64_sse.la && ln -s ../libnb_kernel_x86_64_sse.la libnb_kernel_x86_64_sse.la)
Making all in nb_kernel_c
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel010.lo -MD -MP -MF .deps/nb_kernel010.Tpo -c -o nb_kernel010.lo nb_kernel010.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel010.lo -MD -MP -MF .deps/nb_kernel010.Tpo -c nb_kernel010.c  -fno-common -DPIC -o .libs/nb_kernel010.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel010.lo -MD -MP -MF .deps/nb_kernel010.Tpo -c nb_kernel010.c -o nb_kernel010.o >/dev/null 2>&1
mv -f .deps/nb_kernel010.Tpo .deps/nb_kernel010.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel020.lo -MD -MP -MF .deps/nb_kernel020.Tpo -c -o nb_kernel020.lo nb_kernel020.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel020.lo -MD -MP -MF .deps/nb_kernel020.Tpo -c nb_kernel020.c  -fno-common -DPIC -o .libs/nb_kernel020.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel020.lo -MD -MP -MF .deps/nb_kernel020.Tpo -c nb_kernel020.c -o nb_kernel020.o >/dev/null 2>&1
mv -f .deps/nb_kernel020.Tpo .deps/nb_kernel020.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel030.lo -MD -MP -MF .deps/nb_kernel030.Tpo -c -o nb_kernel030.lo nb_kernel030.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel030.lo -MD -MP -MF .deps/nb_kernel030.Tpo -c nb_kernel030.c  -fno-common -DPIC -o .libs/nb_kernel030.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel030.lo -MD -MP -MF .deps/nb_kernel030.Tpo -c nb_kernel030.c -o nb_kernel030.o >/dev/null 2>&1
mv -f .deps/nb_kernel030.Tpo .deps/nb_kernel030.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel100.lo -MD -MP -MF .deps/nb_kernel100.Tpo -c -o nb_kernel100.lo nb_kernel100.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel100.lo -MD -MP -MF .deps/nb_kernel100.Tpo -c nb_kernel100.c  -fno-common -DPIC -o .libs/nb_kernel100.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel100.lo -MD -MP -MF .deps/nb_kernel100.Tpo -c nb_kernel100.c -o nb_kernel100.o >/dev/null 2>&1
mv -f .deps/nb_kernel100.Tpo .deps/nb_kernel100.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel101.lo -MD -MP -MF .deps/nb_kernel101.Tpo -c -o nb_kernel101.lo nb_kernel101.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel101.lo -MD -MP -MF .deps/nb_kernel101.Tpo -c nb_kernel101.c  -fno-common -DPIC -o .libs/nb_kernel101.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel101.lo -MD -MP -MF .deps/nb_kernel101.Tpo -c nb_kernel101.c -o nb_kernel101.o >/dev/null 2>&1
mv -f .deps/nb_kernel101.Tpo .deps/nb_kernel101.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel102.lo -MD -MP -MF .deps/nb_kernel102.Tpo -c -o nb_kernel102.lo nb_kernel102.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel102.lo -MD -MP -MF .deps/nb_kernel102.Tpo -c nb_kernel102.c  -fno-common -DPIC -o .libs/nb_kernel102.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel102.lo -MD -MP -MF .deps/nb_kernel102.Tpo -c nb_kernel102.c -o nb_kernel102.o >/dev/null 2>&1
mv -f .deps/nb_kernel102.Tpo .deps/nb_kernel102.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel103.lo -MD -MP -MF .deps/nb_kernel103.Tpo -c -o nb_kernel103.lo nb_kernel103.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel103.lo -MD -MP -MF .deps/nb_kernel103.Tpo -c nb_kernel103.c  -fno-common -DPIC -o .libs/nb_kernel103.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel103.lo -MD -MP -MF .deps/nb_kernel103.Tpo -c nb_kernel103.c -o nb_kernel103.o >/dev/null 2>&1
mv -f .deps/nb_kernel103.Tpo .deps/nb_kernel103.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel104.lo -MD -MP -MF .deps/nb_kernel104.Tpo -c -o nb_kernel104.lo nb_kernel104.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel104.lo -MD -MP -MF .deps/nb_kernel104.Tpo -c nb_kernel104.c  -fno-common -DPIC -o .libs/nb_kernel104.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel104.lo -MD -MP -MF .deps/nb_kernel104.Tpo -c nb_kernel104.c -o nb_kernel104.o >/dev/null 2>&1
mv -f .deps/nb_kernel104.Tpo .deps/nb_kernel104.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel110.lo -MD -MP -MF .deps/nb_kernel110.Tpo -c -o nb_kernel110.lo nb_kernel110.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel110.lo -MD -MP -MF .deps/nb_kernel110.Tpo -c nb_kernel110.c  -fno-common -DPIC -o .libs/nb_kernel110.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel110.lo -MD -MP -MF .deps/nb_kernel110.Tpo -c nb_kernel110.c -o nb_kernel110.o >/dev/null 2>&1
mv -f .deps/nb_kernel110.Tpo .deps/nb_kernel110.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel111.lo -MD -MP -MF .deps/nb_kernel111.Tpo -c -o nb_kernel111.lo nb_kernel111.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel111.lo -MD -MP -MF .deps/nb_kernel111.Tpo -c nb_kernel111.c  -fno-common -DPIC -o .libs/nb_kernel111.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel111.lo -MD -MP -MF .deps/nb_kernel111.Tpo -c nb_kernel111.c -o nb_kernel111.o >/dev/null 2>&1
mv -f .deps/nb_kernel111.Tpo .deps/nb_kernel111.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel112.lo -MD -MP -MF .deps/nb_kernel112.Tpo -c -o nb_kernel112.lo nb_kernel112.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel112.lo -MD -MP -MF .deps/nb_kernel112.Tpo -c nb_kernel112.c  -fno-common -DPIC -o .libs/nb_kernel112.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel112.lo -MD -MP -MF .deps/nb_kernel112.Tpo -c nb_kernel112.c -o nb_kernel112.o >/dev/null 2>&1
mv -f .deps/nb_kernel112.Tpo .deps/nb_kernel112.Plo
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/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel332.lo -MD -MP -MF .deps/nb_kernel332.Tpo -c -o nb_kernel332.lo nb_kernel332.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel332.lo -MD -MP -MF .deps/nb_kernel332.Tpo -c nb_kernel332.c  -fno-common -DPIC -o .libs/nb_kernel332.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel332.lo -MD -MP -MF .deps/nb_kernel332.Tpo -c nb_kernel332.c -o nb_kernel332.o >/dev/null 2>&1
mv -f .deps/nb_kernel332.Tpo .deps/nb_kernel332.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel333.lo -MD -MP -MF .deps/nb_kernel333.Tpo -c -o nb_kernel333.lo nb_kernel333.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel333.lo -MD -MP -MF .deps/nb_kernel333.Tpo -c nb_kernel333.c  -fno-common -DPIC -o .libs/nb_kernel333.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel333.lo -MD -MP -MF .deps/nb_kernel333.Tpo -c nb_kernel333.c -o nb_kernel333.o >/dev/null 2>&1
mv -f .deps/nb_kernel333.Tpo .deps/nb_kernel333.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel334.lo -MD -MP -MF .deps/nb_kernel334.Tpo -c -o nb_kernel334.lo nb_kernel334.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel334.lo -MD -MP -MF .deps/nb_kernel334.Tpo -c nb_kernel334.c  -fno-common -DPIC -o .libs/nb_kernel334.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel334.lo -MD -MP -MF .deps/nb_kernel334.Tpo -c nb_kernel334.c -o nb_kernel334.o >/dev/null 2>&1
mv -f .deps/nb_kernel334.Tpo .deps/nb_kernel334.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400.lo -MD -MP -MF .deps/nb_kernel400.Tpo -c -o nb_kernel400.lo nb_kernel400.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400.lo -MD -MP -MF .deps/nb_kernel400.Tpo -c nb_kernel400.c  -fno-common -DPIC -o .libs/nb_kernel400.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel400.lo -MD -MP -MF .deps/nb_kernel400.Tpo -c nb_kernel400.c -o nb_kernel400.o >/dev/null 2>&1
mv -f .deps/nb_kernel400.Tpo .deps/nb_kernel400.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410.lo -MD -MP -MF .deps/nb_kernel410.Tpo -c -o nb_kernel410.lo nb_kernel410.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410.lo -MD -MP -MF .deps/nb_kernel410.Tpo -c nb_kernel410.c  -fno-common -DPIC -o .libs/nb_kernel410.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel410.lo -MD -MP -MF .deps/nb_kernel410.Tpo -c nb_kernel410.c -o nb_kernel410.o >/dev/null 2>&1
mv -f .deps/nb_kernel410.Tpo .deps/nb_kernel410.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel420.lo -MD -MP -MF .deps/nb_kernel420.Tpo -c -o nb_kernel420.lo nb_kernel420.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel420.lo -MD -MP -MF .deps/nb_kernel420.Tpo -c nb_kernel420.c  -fno-common -DPIC -o .libs/nb_kernel420.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel420.lo -MD -MP -MF .deps/nb_kernel420.Tpo -c nb_kernel420.c -o nb_kernel420.o >/dev/null 2>&1
mv -f .deps/nb_kernel420.Tpo .deps/nb_kernel420.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430.lo -MD -MP -MF .deps/nb_kernel430.Tpo -c -o nb_kernel430.lo nb_kernel430.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430.lo -MD -MP -MF .deps/nb_kernel430.Tpo -c nb_kernel430.c  -fno-common -DPIC -o .libs/nb_kernel430.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel430.lo -MD -MP -MF .deps/nb_kernel430.Tpo -c nb_kernel430.c -o nb_kernel430.o >/dev/null 2>&1
mv -f .deps/nb_kernel430.Tpo .deps/nb_kernel430.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall.lo -MD -MP -MF .deps/nb_kernel_allvsall.Tpo -c -o nb_kernel_allvsall.lo nb_kernel_allvsall.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall.lo -MD -MP -MF .deps/nb_kernel_allvsall.Tpo -c nb_kernel_allvsall.c  -fno-common -DPIC -o .libs/nb_kernel_allvsall.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsall.lo -MD -MP -MF .deps/nb_kernel_allvsall.Tpo -c nb_kernel_allvsall.c -o nb_kernel_allvsall.o >/dev/null 2>&1
mv -f .deps/nb_kernel_allvsall.Tpo .deps/nb_kernel_allvsall.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb.lo -MD -MP -MF .deps/nb_kernel_allvsallgb.Tpo -c -o nb_kernel_allvsallgb.lo nb_kernel_allvsallgb.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb.lo -MD -MP -MF .deps/nb_kernel_allvsallgb.Tpo -c nb_kernel_allvsallgb.c  -fno-common -DPIC -o .libs/nb_kernel_allvsallgb.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_allvsallgb.lo -MD -MP -MF .deps/nb_kernel_allvsallgb.Tpo -c nb_kernel_allvsallgb.c -o nb_kernel_allvsallgb.o >/dev/null 2>&1
mv -f .deps/nb_kernel_allvsallgb.Tpo .deps/nb_kernel_allvsallgb.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_c.lo -MD -MP -MF .deps/nb_kernel_c.Tpo -c -o nb_kernel_c.lo nb_kernel_c.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_c.lo -MD -MP -MF .deps/nb_kernel_c.Tpo -c nb_kernel_c.c  -fno-common -DPIC -o .libs/nb_kernel_c.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_kernel_c.lo -MD -MP -MF .deps/nb_kernel_c.Tpo -c nb_kernel_c.c -o nb_kernel_c.o >/dev/null 2>&1
mv -f .deps/nb_kernel_c.Tpo .deps/nb_kernel_c.Plo
/bin/sh ../../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libnb_kernel_c.la  nb_kernel010.lo nb_kernel020.lo nb_kernel030.lo nb_kernel100.lo nb_kernel101.lo nb_kernel102.lo nb_kernel103.lo nb_kernel104.lo nb_kernel110.lo nb_kernel111.lo nb_kernel112.lo nb_kernel113.lo nb_kernel114.lo nb_kernel120.lo nb_kernel121.lo nb_kernel122.lo nb_kernel123.lo nb_kernel124.lo nb_kernel130.lo nb_kernel131.lo nb_kernel132.lo nb_kernel133.lo nb_kernel134.lo nb_kernel200.lo nb_kernel201.lo nb_kernel202.lo nb_kernel203.lo nb_kernel204.lo nb_kernel210.lo nb_kernel211.lo nb_kernel212.lo nb_kernel213.lo nb_kernel214.lo nb_kernel220.lo nb_kernel221.lo nb_kernel222.lo nb_kernel223.lo nb_kernel224.lo nb_kernel230.lo nb_kernel231.lo nb_kernel232.lo nb_kernel233.lo nb_kernel234.lo nb_kernel300.lo nb_kernel301.lo nb_kernel302.lo nb_kernel303.lo nb_kernel304.lo nb_kernel310.lo nb_kernel311.lo nb_kernel312.lo nb_kernel313.lo nb_kernel314.lo nb_kernel320.lo nb_kernel321.lo nb_kernel322.lo nb_kernel323.lo nb_kernel324.lo nb_kernel330.lo nb_kernel331.lo nb_kernel332.lo nb_kernel333.lo nb_kernel334.lo nb_kernel400.lo nb_kernel410.lo nb_kernel420.lo nb_kernel430.lo nb_kernel_allvsall.lo nb_kernel_allvsallgb.lo nb_kernel_c.lo  -lm  
ar cru .libs/libnb_kernel_c.a .libs/nb_kernel010.o .libs/nb_kernel020.o .libs/nb_kernel030.o .libs/nb_kernel100.o .libs/nb_kernel101.o .libs/nb_kernel102.o .libs/nb_kernel103.o .libs/nb_kernel104.o .libs/nb_kernel110.o .libs/nb_kernel111.o .libs/nb_kernel112.o .libs/nb_kernel113.o .libs/nb_kernel114.o .libs/nb_kernel120.o .libs/nb_kernel121.o .libs/nb_kernel122.o .libs/nb_kernel123.o .libs/nb_kernel124.o .libs/nb_kernel130.o .libs/nb_kernel131.o .libs/nb_kernel132.o .libs/nb_kernel133.o .libs/nb_kernel134.o .libs/nb_kernel200.o .libs/nb_kernel201.o .libs/nb_kernel202.o .libs/nb_kernel203.o .libs/nb_kernel204.o .libs/nb_kernel210.o .libs/nb_kernel211.o .libs/nb_kernel212.o .libs/nb_kernel213.o .libs/nb_kernel214.o .libs/nb_kernel220.o .libs/nb_kernel221.o .libs/nb_kernel222.o .libs/nb_kernel223.o .libs/nb_kernel224.o .libs/nb_kernel230.o .libs/nb_kernel231.o .libs/nb_kernel232.o .libs/nb_kernel233.o .libs/nb_kernel234.o .libs/nb_kernel300.o .libs/nb_kernel301.o .libs/nb_kernel302.o .libs/nb_kernel303.o .libs/nb_kernel304.o .libs/nb_kernel310.o .libs/nb_kernel311.o .libs/nb_kernel312.o .libs/nb_kernel313.o .libs/nb_kernel314.o .libs/nb_kernel320.o .libs/nb_kernel321.o .libs/nb_kernel322.o .libs/nb_kernel323.o .libs/nb_kernel324.o .libs/nb_kernel330.o .libs/nb_kernel331.o .libs/nb_kernel332.o .libs/nb_kernel333.o .libs/nb_kernel334.o .libs/nb_kernel400.o .libs/nb_kernel410.o .libs/nb_kernel420.o .libs/nb_kernel430.o .libs/nb_kernel_allvsall.o .libs/nb_kernel_allvsallgb.o .libs/nb_kernel_c.o
ranlib .libs/libnb_kernel_c.a
creating libnb_kernel_c.la
(cd .libs && rm -f libnb_kernel_c.la && ln -s ../libnb_kernel_c.la libnb_kernel_c.la)
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nonbonded.lo -MD -MP -MF .deps/nonbonded.Tpo -c -o nonbonded.lo nonbonded.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nonbonded.lo -MD -MP -MF .deps/nonbonded.Tpo -c nonbonded.c  -fno-common -DPIC -o .libs/nonbonded.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nonbonded.lo -MD -MP -MF .deps/nonbonded.Tpo -c nonbonded.c -o nonbonded.o >/dev/null 2>&1
mv -f .deps/nonbonded.Tpo .deps/nonbonded.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_free_energy.lo -MD -MP -MF .deps/nb_free_energy.Tpo -c -o nb_free_energy.lo nb_free_energy.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_free_energy.lo -MD -MP -MF .deps/nb_free_energy.Tpo -c nb_free_energy.c  -fno-common -DPIC -o .libs/nb_free_energy.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_free_energy.lo -MD -MP -MF .deps/nb_free_energy.Tpo -c nb_free_energy.c -o nb_free_energy.o >/dev/null 2>&1
mv -f .deps/nb_free_energy.Tpo .deps/nb_free_energy.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic.lo -MD -MP -MF .deps/nb_generic.Tpo -c -o nb_generic.lo nb_generic.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic.lo -MD -MP -MF .deps/nb_generic.Tpo -c nb_generic.c  -fno-common -DPIC -o .libs/nb_generic.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic.lo -MD -MP -MF .deps/nb_generic.Tpo -c nb_generic.c -o nb_generic.o >/dev/null 2>&1
mv -f .deps/nb_generic.Tpo .deps/nb_generic.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic_cg.lo -MD -MP -MF .deps/nb_generic_cg.Tpo -c -o nb_generic_cg.lo nb_generic_cg.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic_cg.lo -MD -MP -MF .deps/nb_generic_cg.Tpo -c nb_generic_cg.c  -fno-common -DPIC -o .libs/nb_generic_cg.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nb_generic_cg.lo -MD -MP -MF .deps/nb_generic_cg.Tpo -c nb_generic_cg.c -o nb_generic_cg.o >/dev/null 2>&1
mv -f .deps/nb_generic_cg.Tpo .deps/nb_generic_cg.Plo
/bin/sh ../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libnonbonded.la  nonbonded.lo nb_free_energy.lo nb_generic.lo nb_generic_cg.lo nb_kernel_c/libnb_kernel_c.la                   nb_kernel_x86_64_sse/libnb_kernel_x86_64_sse.la                                                -lm  
rm -fr .libs/libnonbonded.lax
mkdir .libs/libnonbonded.lax
rm -fr .libs/libnonbonded.lax/libnb_kernel_c.a
mkdir .libs/libnonbonded.lax/libnb_kernel_c.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/nb_kernel_c/.libs/libnb_kernel_c.a
(cd .libs/libnonbonded.lax/libnb_kernel_c.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/nb_kernel_c/.libs/libnb_kernel_c.a)
rm -fr .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a
mkdir .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/.libs/libnb_kernel_x86_64_sse.a
(cd .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/.libs/libnb_kernel_x86_64_sse.a)
ar cru .libs/libnonbonded.a .libs/nonbonded.o .libs/nb_free_energy.o .libs/nb_generic.o .libs/nb_generic_cg.o  .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel010.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel020.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel030.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel100.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel101.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel102.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel103.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel104.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel110.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel111.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel112.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel113.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel114.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel120.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel121.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel122.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel123.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel124.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel130.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel131.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel132.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel133.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel134.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel200.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel201.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel202.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel203.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel204.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel210.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel211.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel212.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel213.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel214.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel220.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel221.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel222.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel223.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel224.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel230.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel231.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel232.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel233.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel234.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel300.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel301.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel302.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel303.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel304.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel310.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel311.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel312.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel313.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel314.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel320.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel321.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel322.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel323.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel324.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel330.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel331.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel332.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel333.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel334.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel400.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel410.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel420.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel430.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel_allvsall.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel_allvsallgb.o .libs/libnonbonded.lax/libnb_kernel_c.a/nb_kernel_c.o  .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel010_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel030_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel100_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel101_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel102_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel103_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel104_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel110_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel111_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel112_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel113_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel114_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel130_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel131_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel132_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel133_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel134_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel200_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel201_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel202_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel203_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel204_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel210_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel211_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel212_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel213_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel214_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel230_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel231_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel232_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel233_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel234_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel300_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel301_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel302_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel303_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel304_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel310_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel311_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel312_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel313_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel314_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel330_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel331_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel332_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel333_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel334_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel400_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel410_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel430_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_allvsall_sse2_single.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_allvsallgb_sse2_single.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse_test_asm.o 
ranlib .libs/libnonbonded.a
rm -fr .libs/libnonbonded.lax
creating libnonbonded.la
(cd .libs && rm -f libnonbonded.la && ln -s ../libnonbonded.la libnonbonded.la)
Making all in selection
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compiler.lo -MD -MP -MF .deps/compiler.Tpo -c -o compiler.lo compiler.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compiler.lo -MD -MP -MF .deps/compiler.Tpo -c compiler.c  -fno-common -DPIC -o .libs/compiler.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compiler.lo -MD -MP -MF .deps/compiler.Tpo -c compiler.c -o compiler.o >/dev/null 2>&1
mv -f .deps/compiler.Tpo .deps/compiler.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT evaluate.lo -MD -MP -MF .deps/evaluate.Tpo -c -o evaluate.lo evaluate.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT evaluate.lo -MD -MP -MF .deps/evaluate.Tpo -c evaluate.c  -fno-common -DPIC -o .libs/evaluate.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT evaluate.lo -MD -MP -MF .deps/evaluate.Tpo -c evaluate.c -o evaluate.o >/dev/null 2>&1
mv -f .deps/evaluate.Tpo .deps/evaluate.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mempool.lo -MD -MP -MF .deps/mempool.Tpo -c -o mempool.lo mempool.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mempool.lo -MD -MP -MF .deps/mempool.Tpo -c mempool.c  -fno-common -DPIC -o .libs/mempool.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mempool.lo -MD -MP -MF .deps/mempool.Tpo -c mempool.c -o mempool.o >/dev/null 2>&1
mv -f .deps/mempool.Tpo .deps/mempool.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT params.lo -MD -MP -MF .deps/params.Tpo -c -o params.lo params.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT params.lo -MD -MP -MF .deps/params.Tpo -c params.c  -fno-common -DPIC -o .libs/params.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT params.lo -MD -MP -MF .deps/params.Tpo -c params.c -o params.o >/dev/null 2>&1
mv -f .deps/params.Tpo .deps/params.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parser.lo -MD -MP -MF .deps/parser.Tpo -c -o parser.lo parser.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parser.lo -MD -MP -MF .deps/parser.Tpo -c parser.c  -fno-common -DPIC -o .libs/parser.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parser.lo -MD -MP -MF .deps/parser.Tpo -c parser.c -o parser.o >/dev/null 2>&1
mv -f .deps/parser.Tpo .deps/parser.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parsetree.lo -MD -MP -MF .deps/parsetree.Tpo -c -o parsetree.lo parsetree.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parsetree.lo -MD -MP -MF .deps/parsetree.Tpo -c parsetree.c  -fno-common -DPIC -o .libs/parsetree.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT parsetree.lo -MD -MP -MF .deps/parsetree.Tpo -c parsetree.c -o parsetree.o >/dev/null 2>&1
mv -f .deps/parsetree.Tpo .deps/parsetree.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner.lo -MD -MP -MF .deps/scanner.Tpo -c -o scanner.lo scanner.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner.lo -MD -MP -MF .deps/scanner.Tpo -c scanner.c  -fno-common -DPIC -o .libs/scanner.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner.lo -MD -MP -MF .deps/scanner.Tpo -c scanner.c -o scanner.o >/dev/null 2>&1
mv -f .deps/scanner.Tpo .deps/scanner.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner_internal.lo -MD -MP -MF .deps/scanner_internal.Tpo -c -o scanner_internal.lo scanner_internal.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner_internal.lo -MD -MP -MF .deps/scanner_internal.Tpo -c scanner_internal.c  -fno-common -DPIC -o .libs/scanner_internal.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT scanner_internal.lo -MD -MP -MF .deps/scanner_internal.Tpo -c scanner_internal.c -o scanner_internal.o >/dev/null 2>&1
mv -f .deps/scanner_internal.Tpo .deps/scanner_internal.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selhelp.lo -MD -MP -MF .deps/selhelp.Tpo -c -o selhelp.lo selhelp.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selhelp.lo -MD -MP -MF .deps/selhelp.Tpo -c selhelp.c  -fno-common -DPIC -o .libs/selhelp.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selhelp.lo -MD -MP -MF .deps/selhelp.Tpo -c selhelp.c -o selhelp.o >/dev/null 2>&1
mv -f .deps/selhelp.Tpo .deps/selhelp.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selection.lo -MD -MP -MF .deps/selection.Tpo -c -o selection.lo selection.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selection.lo -MD -MP -MF .deps/selection.Tpo -c selection.c  -fno-common -DPIC -o .libs/selection.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selection.lo -MD -MP -MF .deps/selection.Tpo -c selection.c -o selection.o >/dev/null 2>&1
mv -f .deps/selection.Tpo .deps/selection.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selelem.lo -MD -MP -MF .deps/selelem.Tpo -c -o selelem.lo selelem.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selelem.lo -MD -MP -MF .deps/selelem.Tpo -c selelem.c  -fno-common -DPIC -o .libs/selelem.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selelem.lo -MD -MP -MF .deps/selelem.Tpo -c selelem.c -o selelem.o >/dev/null 2>&1
mv -f .deps/selelem.Tpo .deps/selelem.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selmethod.lo -MD -MP -MF .deps/selmethod.Tpo -c -o selmethod.lo selmethod.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selmethod.lo -MD -MP -MF .deps/selmethod.Tpo -c selmethod.c  -fno-common -DPIC -o .libs/selmethod.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selmethod.lo -MD -MP -MF .deps/selmethod.Tpo -c selmethod.c -o selmethod.o >/dev/null 2>&1
mv -f .deps/selmethod.Tpo .deps/selmethod.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selvalue.lo -MD -MP -MF .deps/selvalue.Tpo -c -o selvalue.lo selvalue.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selvalue.lo -MD -MP -MF .deps/selvalue.Tpo -c selvalue.c  -fno-common -DPIC -o .libs/selvalue.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT selvalue.lo -MD -MP -MF .deps/selvalue.Tpo -c selvalue.c -o selvalue.o >/dev/null 2>&1
mv -f .deps/selvalue.Tpo .deps/selvalue.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_compare.lo -MD -MP -MF .deps/sm_compare.Tpo -c -o sm_compare.lo sm_compare.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_compare.lo -MD -MP -MF .deps/sm_compare.Tpo -c sm_compare.c  -fno-common -DPIC -o .libs/sm_compare.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_compare.lo -MD -MP -MF .deps/sm_compare.Tpo -c sm_compare.c -o sm_compare.o >/dev/null 2>&1
mv -f .deps/sm_compare.Tpo .deps/sm_compare.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_distance.lo -MD -MP -MF .deps/sm_distance.Tpo -c -o sm_distance.lo sm_distance.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_distance.lo -MD -MP -MF .deps/sm_distance.Tpo -c sm_distance.c  -fno-common -DPIC -o .libs/sm_distance.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_distance.lo -MD -MP -MF .deps/sm_distance.Tpo -c sm_distance.c -o sm_distance.o >/dev/null 2>&1
mv -f .deps/sm_distance.Tpo .deps/sm_distance.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_insolidangle.lo -MD -MP -MF .deps/sm_insolidangle.Tpo -c -o sm_insolidangle.lo sm_insolidangle.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_insolidangle.lo -MD -MP -MF .deps/sm_insolidangle.Tpo -c sm_insolidangle.c  -fno-common -DPIC -o .libs/sm_insolidangle.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_insolidangle.lo -MD -MP -MF .deps/sm_insolidangle.Tpo -c sm_insolidangle.c -o sm_insolidangle.o >/dev/null 2>&1
mv -f .deps/sm_insolidangle.Tpo .deps/sm_insolidangle.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_keywords.lo -MD -MP -MF .deps/sm_keywords.Tpo -c -o sm_keywords.lo sm_keywords.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_keywords.lo -MD -MP -MF .deps/sm_keywords.Tpo -c sm_keywords.c  -fno-common -DPIC -o .libs/sm_keywords.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_keywords.lo -MD -MP -MF .deps/sm_keywords.Tpo -c sm_keywords.c -o sm_keywords.o >/dev/null 2>&1
mv -f .deps/sm_keywords.Tpo .deps/sm_keywords.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_merge.lo -MD -MP -MF .deps/sm_merge.Tpo -c -o sm_merge.lo sm_merge.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_merge.lo -MD -MP -MF .deps/sm_merge.Tpo -c sm_merge.c  -fno-common -DPIC -o .libs/sm_merge.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_merge.lo -MD -MP -MF .deps/sm_merge.Tpo -c sm_merge.c -o sm_merge.o >/dev/null 2>&1
mv -f .deps/sm_merge.Tpo .deps/sm_merge.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_permute.lo -MD -MP -MF .deps/sm_permute.Tpo -c -o sm_permute.lo sm_permute.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_permute.lo -MD -MP -MF .deps/sm_permute.Tpo -c sm_permute.c  -fno-common -DPIC -o .libs/sm_permute.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_permute.lo -MD -MP -MF .deps/sm_permute.Tpo -c sm_permute.c -o sm_permute.o >/dev/null 2>&1
mv -f .deps/sm_permute.Tpo .deps/sm_permute.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_position.lo -MD -MP -MF .deps/sm_position.Tpo -c -o sm_position.lo sm_position.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_position.lo -MD -MP -MF .deps/sm_position.Tpo -c sm_position.c  -fno-common -DPIC -o .libs/sm_position.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_position.lo -MD -MP -MF .deps/sm_position.Tpo -c sm_position.c -o sm_position.o >/dev/null 2>&1
mv -f .deps/sm_position.Tpo .deps/sm_position.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_same.lo -MD -MP -MF .deps/sm_same.Tpo -c -o sm_same.lo sm_same.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_same.lo -MD -MP -MF .deps/sm_same.Tpo -c sm_same.c  -fno-common -DPIC -o .libs/sm_same.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_same.lo -MD -MP -MF .deps/sm_same.Tpo -c sm_same.c -o sm_same.o >/dev/null 2>&1
mv -f .deps/sm_same.Tpo .deps/sm_same.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_simple.lo -MD -MP -MF .deps/sm_simple.Tpo -c -o sm_simple.lo sm_simple.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_simple.lo -MD -MP -MF .deps/sm_simple.Tpo -c sm_simple.c  -fno-common -DPIC -o .libs/sm_simple.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sm_simple.lo -MD -MP -MF .deps/sm_simple.Tpo -c sm_simple.c -o sm_simple.o >/dev/null 2>&1
mv -f .deps/sm_simple.Tpo .deps/sm_simple.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT symrec.lo -MD -MP -MF .deps/symrec.Tpo -c -o symrec.lo symrec.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT symrec.lo -MD -MP -MF .deps/symrec.Tpo -c symrec.c  -fno-common -DPIC -o .libs/symrec.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT symrec.lo -MD -MP -MF .deps/symrec.Tpo -c symrec.c -o symrec.o >/dev/null 2>&1
mv -f .deps/symrec.Tpo .deps/symrec.Plo
/bin/sh ../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libselection.la  compiler.lo evaluate.lo mempool.lo params.lo parser.lo parsetree.lo scanner.lo scanner_internal.lo selhelp.lo selection.lo selelem.lo selmethod.lo selvalue.lo sm_compare.lo sm_distance.lo sm_insolidangle.lo sm_keywords.lo sm_merge.lo sm_permute.lo sm_position.lo sm_same.lo sm_simple.lo symrec.lo  -lm  
ar cru .libs/libselection.a .libs/compiler.o .libs/evaluate.o .libs/mempool.o .libs/params.o .libs/parser.o .libs/parsetree.o .libs/scanner.o .libs/scanner_internal.o .libs/selhelp.o .libs/selection.o .libs/selelem.o .libs/selmethod.o .libs/selvalue.o .libs/sm_compare.o .libs/sm_distance.o .libs/sm_insolidangle.o .libs/sm_keywords.o .libs/sm_merge.o .libs/sm_permute.o .libs/sm_position.o .libs/sm_same.o .libs/sm_simple.o .libs/symrec.o
ranlib .libs/libselection.a
creating libselection.la
(cd .libs && rm -f libselection.la && ln -s ../libselection.la libselection.la)
Making all in statistics
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_statistics.lo -MD -MP -MF .deps/gmx_statistics.Tpo -c -o gmx_statistics.lo gmx_statistics.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_statistics.lo -MD -MP -MF .deps/gmx_statistics.Tpo -c gmx_statistics.c  -fno-common -DPIC -o .libs/gmx_statistics.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_statistics.lo -MD -MP -MF .deps/gmx_statistics.Tpo -c gmx_statistics.c -o gmx_statistics.o >/dev/null 2>&1
mv -f .deps/gmx_statistics.Tpo .deps/gmx_statistics.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT histogram.lo -MD -MP -MF .deps/histogram.Tpo -c -o histogram.lo histogram.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT histogram.lo -MD -MP -MF .deps/histogram.Tpo -c histogram.c  -fno-common -DPIC -o .libs/histogram.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT histogram.lo -MD -MP -MF .deps/histogram.Tpo -c histogram.c -o histogram.o >/dev/null 2>&1
mv -f .deps/histogram.Tpo .deps/histogram.Plo
/bin/sh ../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libstatistics.la  gmx_statistics.lo histogram.lo  -lm  
ar cru .libs/libstatistics.a .libs/gmx_statistics.o .libs/histogram.o
ranlib .libs/libstatistics.a
creating libstatistics.la
(cd .libs && rm -f libstatistics.la && ln -s ../libstatistics.la libstatistics.la)
Making all in trajana
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT centerofmass.lo -MD -MP -MF .deps/centerofmass.Tpo -c -o centerofmass.lo centerofmass.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT centerofmass.lo -MD -MP -MF .deps/centerofmass.Tpo -c centerofmass.c  -fno-common -DPIC -o .libs/centerofmass.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT centerofmass.lo -MD -MP -MF .deps/centerofmass.Tpo -c centerofmass.c -o centerofmass.o >/dev/null 2>&1
mv -f .deps/centerofmass.Tpo .deps/centerofmass.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT displacement.lo -MD -MP -MF .deps/displacement.Tpo -c -o displacement.lo displacement.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT displacement.lo -MD -MP -MF .deps/displacement.Tpo -c displacement.c  -fno-common -DPIC -o .libs/displacement.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT displacement.lo -MD -MP -MF .deps/displacement.Tpo -c displacement.c -o displacement.o >/dev/null 2>&1
mv -f .deps/displacement.Tpo .deps/displacement.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT indexutil.lo -MD -MP -MF .deps/indexutil.Tpo -c -o indexutil.lo indexutil.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT indexutil.lo -MD -MP -MF .deps/indexutil.Tpo -c indexutil.c  -fno-common -DPIC -o .libs/indexutil.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT indexutil.lo -MD -MP -MF .deps/indexutil.Tpo -c indexutil.c -o indexutil.o >/dev/null 2>&1
mv -f .deps/indexutil.Tpo .deps/indexutil.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nbsearch.lo -MD -MP -MF .deps/nbsearch.Tpo -c -o nbsearch.lo nbsearch.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nbsearch.lo -MD -MP -MF .deps/nbsearch.Tpo -c nbsearch.c  -fno-common -DPIC -o .libs/nbsearch.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nbsearch.lo -MD -MP -MF .deps/nbsearch.Tpo -c nbsearch.c -o nbsearch.o >/dev/null 2>&1
mv -f .deps/nbsearch.Tpo .deps/nbsearch.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT poscalc.lo -MD -MP -MF .deps/poscalc.Tpo -c -o poscalc.lo poscalc.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT poscalc.lo -MD -MP -MF .deps/poscalc.Tpo -c poscalc.c  -fno-common -DPIC -o .libs/poscalc.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT poscalc.lo -MD -MP -MF .deps/poscalc.Tpo -c poscalc.c -o poscalc.o >/dev/null 2>&1
mv -f .deps/poscalc.Tpo .deps/poscalc.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT position.lo -MD -MP -MF .deps/position.Tpo -c -o position.lo position.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT position.lo -MD -MP -MF .deps/position.Tpo -c position.c  -fno-common -DPIC -o .libs/position.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT position.lo -MD -MP -MF .deps/position.Tpo -c position.c -o position.o >/dev/null 2>&1
mv -f .deps/position.Tpo .deps/position.Plo
/bin/sh ../../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trajana.lo -MD -MP -MF .deps/trajana.Tpo -c -o trajana.lo trajana.c
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trajana.lo -MD -MP -MF .deps/trajana.Tpo -c trajana.c  -fno-common -DPIC -o .libs/trajana.o
 mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trajana.lo -MD -MP -MF .deps/trajana.Tpo -c trajana.c -o trajana.o >/dev/null 2>&1
mv -f .deps/trajana.Tpo .deps/trajana.Plo
/bin/sh ../../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o libtrajana.la  centerofmass.lo displacement.lo indexutil.lo nbsearch.lo poscalc.lo position.lo trajana.lo  -lm  
ar cru .libs/libtrajana.a .libs/centerofmass.o .libs/displacement.o .libs/indexutil.o .libs/nbsearch.o .libs/poscalc.o .libs/position.o .libs/trajana.o
ranlib .libs/libtrajana.a
creating libtrajana.la
(cd .libs && rm -f libtrajana.la && ln -s ../libtrajana.la libtrajana.la)
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c -o 3dview.lo 3dview.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c 3dview.c  -fno-common -DPIC -o .libs/3dview.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c 3dview.c -o 3dview.o >/dev/null 2>&1
mv -f .deps/3dview.Tpo .deps/3dview.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c -o atomprop.lo atomprop.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c  -fno-common -DPIC -o .libs/atomprop.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c -o atomprop.o >/dev/null 2>&1
mv -f .deps/atomprop.Tpo .deps/atomprop.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c -o bondfree.lo bondfree.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c  -fno-common -DPIC -o .libs/bondfree.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c -o bondfree.o >/dev/null 2>&1
mv -f .deps/bondfree.Tpo .deps/bondfree.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c -o calcgrid.lo calcgrid.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c calcgrid.c  -fno-common -DPIC -o .libs/calcgrid.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c calcgrid.c -o calcgrid.o >/dev/null 2>&1
mv -f .deps/calcgrid.Tpo .deps/calcgrid.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calch.lo -MD -MP -MF .deps/calch.Tpo -c -o calch.lo calch.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calch.lo -MD -MP -MF .deps/calch.Tpo -c calch.c  -fno-common -DPIC -o .libs/calch.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calch.lo -MD -MP -MF .deps/calch.Tpo -c calch.c -o calch.o >/dev/null 2>&1
mv -f .deps/calch.Tpo .deps/calch.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT chargegroup.lo -MD -MP -MF .deps/chargegroup.Tpo -c -o chargegroup.lo chargegroup.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT chargegroup.lo -MD -MP -MF .deps/chargegroup.Tpo -c chargegroup.c  -fno-common -DPIC -o .libs/chargegroup.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT chargegroup.lo -MD -MP -MF .deps/chargegroup.Tpo -c chargegroup.c -o chargegroup.o >/dev/null 2>&1
mv -f .deps/chargegroup.Tpo .deps/chargegroup.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT checkpoint.lo -MD -MP -MF .deps/checkpoint.Tpo -c -o checkpoint.lo checkpoint.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT checkpoint.lo -MD -MP -MF .deps/checkpoint.Tpo -c checkpoint.c  -fno-common -DPIC -o .libs/checkpoint.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT checkpoint.lo -MD -MP -MF .deps/checkpoint.Tpo -c checkpoint.c -o checkpoint.o >/dev/null 2>&1
mv -f .deps/checkpoint.Tpo .deps/checkpoint.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT confio.lo -MD -MP -MF .deps/confio.Tpo -c -o confio.lo confio.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT confio.lo -MD -MP -MF .deps/confio.Tpo -c confio.c  -fno-common -DPIC -o .libs/confio.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT confio.lo -MD -MP -MF .deps/confio.Tpo -c confio.c -o confio.o >/dev/null 2>&1
mv -f .deps/confio.Tpo .deps/confio.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT copyrite.lo -MD -MP -MF .deps/copyrite.Tpo -c -o copyrite.lo copyrite.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT copyrite.lo -MD -MP -MF .deps/copyrite.Tpo -c copyrite.c  -fno-common -DPIC -o .libs/copyrite.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT copyrite.lo -MD -MP -MF .deps/copyrite.Tpo -c copyrite.c -o copyrite.o >/dev/null 2>&1
mv -f .deps/copyrite.Tpo .deps/copyrite.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT disre.lo -MD -MP -MF .deps/disre.Tpo -c -o disre.lo disre.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT disre.lo -MD -MP -MF .deps/disre.Tpo -c disre.c  -fno-common -DPIC -o .libs/disre.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT disre.lo -MD -MP -MF .deps/disre.Tpo -c disre.c -o disre.o >/dev/null 2>&1
mv -f .deps/disre.Tpo .deps/disre.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT do_fit.lo -MD -MP -MF .deps/do_fit.Tpo -c -o do_fit.lo do_fit.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT do_fit.lo -MD -MP -MF .deps/do_fit.Tpo -c do_fit.c  -fno-common -DPIC -o .libs/do_fit.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT do_fit.lo -MD -MP -MF .deps/do_fit.Tpo -c do_fit.c -o do_fit.o >/dev/null 2>&1
mv -f .deps/do_fit.Tpo .deps/do_fit.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT enxio.lo -MD -MP -MF .deps/enxio.Tpo -c -o enxio.lo enxio.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT enxio.lo -MD -MP -MF .deps/enxio.Tpo -c enxio.c  -fno-common -DPIC -o .libs/enxio.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT enxio.lo -MD -MP -MF .deps/enxio.Tpo -c enxio.c -o enxio.o >/dev/null 2>&1
mv -f .deps/enxio.Tpo .deps/enxio.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ewald_util.lo -MD -MP -MF .deps/ewald_util.Tpo -c -o ewald_util.lo ewald_util.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ewald_util.lo -MD -MP -MF .deps/ewald_util.Tpo -c ewald_util.c  -fno-common -DPIC -o .libs/ewald_util.o
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 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vmdio.lo -MD -MP -MF .deps/vmdio.Tpo -c vmdio.c -o vmdio.o >/dev/null 2>&1
mv -f .deps/vmdio.Tpo .deps/vmdio.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c -o vmddlopen.lo vmddlopen.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c vmddlopen.c  -fno-common -DPIC -o .libs/vmddlopen.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c vmddlopen.c -o vmddlopen.o >/dev/null 2>&1
mv -f .deps/vmddlopen.Tpo .deps/vmddlopen.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c -o sighandler.lo sighandler.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c  -fno-common -DPIC -o .libs/sighandler.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c -o sighandler.o >/dev/null 2>&1
mv -f .deps/sighandler.Tpo .deps/sighandler.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c -o oenv.lo oenv.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c  -fno-common -DPIC -o .libs/oenv.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c -o oenv.o >/dev/null 2>&1
mv -f .deps/oenv.Tpo .deps/oenv.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c -o gmxfio_rw.lo gmxfio_rw.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c  -fno-common -DPIC -o .libs/gmxfio_rw.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c -o gmxfio_rw.o >/dev/null 2>&1
mv -f .deps/gmxfio_rw.Tpo .deps/gmxfio_rw.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c -o gmxfio_asc.lo gmxfio_asc.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c gmxfio_asc.c  -fno-common -DPIC -o .libs/gmxfio_asc.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c gmxfio_asc.c -o gmxfio_asc.o >/dev/null 2>&1
mv -f .deps/gmxfio_asc.Tpo .deps/gmxfio_asc.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c -o gmxfio_bin.lo gmxfio_bin.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c  -fno-common -DPIC -o .libs/gmxfio_bin.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c -o gmxfio_bin.o >/dev/null 2>&1
mv -f .deps/gmxfio_bin.Tpo .deps/gmxfio_bin.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c -o gmxfio_xdr.lo gmxfio_xdr.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c  -fno-common -DPIC -o .libs/gmxfio_xdr.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c -o gmxfio_xdr.o >/dev/null 2>&1
mv -f .deps/gmxfio_xdr.Tpo .deps/gmxfio_xdr.Plo
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -no-undefined -version-info 6:0:0 -ldl  -framework Accelerate -o libgmx_mpi.la -rpath /usr/local/gromacs/lib 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo chargegroup.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmx_fatal.lo gmx_sort.lo gmxcpp.lo gmxfio.lo ifunc.lo index.lo inputrec.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo sfactor.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo warninp.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo gmx_matrix.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo gmx_system_xdr.lo md5.lo vmdio.lo vmddlopen.lo sighandler.lo oenv.lo gmxfio_rw.lo gmxfio_asc.lo gmxfio_bin.lo gmxfio_xdr.lo  nonbonded/libnonbonded.la selection/libselection.la statistics/libstatistics.la trajana/libtrajana.la    -lm  
rm -fr .libs/libgmx_mpi.lax
mkdir .libs/libgmx_mpi.lax
rm -fr .libs/libgmx_mpi.lax/libnonbonded.a
mkdir .libs/libgmx_mpi.lax/libnonbonded.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/.libs/libnonbonded.a
(cd .libs/libgmx_mpi.lax/libnonbonded.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/.libs/libnonbonded.a)
rm -fr .libs/libgmx_mpi.lax/libselection.a
mkdir .libs/libgmx_mpi.lax/libselection.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/selection/.libs/libselection.a
(cd .libs/libgmx_mpi.lax/libselection.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/selection/.libs/libselection.a)
rm -fr .libs/libgmx_mpi.lax/libstatistics.a
mkdir .libs/libgmx_mpi.lax/libstatistics.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/statistics/.libs/libstatistics.a
(cd .libs/libgmx_mpi.lax/libstatistics.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/statistics/.libs/libstatistics.a)
rm -fr .libs/libgmx_mpi.lax/libtrajana.a
mkdir .libs/libgmx_mpi.lax/libtrajana.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/trajana/.libs/libtrajana.a
(cd .libs/libgmx_mpi.lax/libtrajana.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/trajana/.libs/libtrajana.a)
mpicc -dynamiclib  -o .libs/libgmx_mpi.6.dylib  .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/chargegroup.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmx_fatal.o .libs/gmx_sort.o .libs/gmxcpp.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/inputrec.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/sfactor.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/warninp.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/gmx_matrix.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o .libs/gmx_system_xdr.o .libs/md5.o .libs/vmdio.o .libs/vmddlopen.o .libs/sighandler.o .libs/oenv.o .libs/gmxfio_rw.o .libs/gmxfio_asc.o .libs/gmxfio_bin.o .libs/gmxfio_xdr.o  .libs/libgmx_mpi.lax/libnonbonded.a/nb_free_energy.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_generic.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_generic_cg.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel010.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel010_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel020.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel030.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel030_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel100.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel100_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel101.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel101_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel102.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel102_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel103.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel103_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel104.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel104_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel110.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel110_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel111.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel111_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel112.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel112_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel113.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel113_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel114.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel114_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel120.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel121.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel122.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel123.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel124.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel130.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel130_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel131.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel131_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel132.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel132_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel133.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel133_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel134.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel134_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel200.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel200_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel201.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel201_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel202.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel202_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel203.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel203_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel204.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel204_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel210.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel210_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel211.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel211_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel212.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel212_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel213.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel213_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel214.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel214_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel220.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel221.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel222.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel223.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel224.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel230.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel230_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel231.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel231_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel232.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel232_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel233.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel233_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel234.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel234_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel300.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel300_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel301.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel301_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel302.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel302_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel303.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel303_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel304.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel304_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel310.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel310_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel311.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel311_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel312.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel312_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel313.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel313_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel314.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel314_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel320.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel321.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel322.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel323.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel324.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel330.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel330_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel331.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel331_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel332.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel332_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel333.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel333_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel334.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel334_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel400.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel400_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel410.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel410_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel420.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel430.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel430_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_allvsall.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_allvsall_sse2_single.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_allvsallgb.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_allvsallgb_sse2_single.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_c.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_x86_64_sse.o .libs/libgmx_mpi.lax/libnonbonded.a/nb_kernel_x86_64_sse_test_asm.o .libs/libgmx_mpi.lax/libnonbonded.a/nonbonded.o  .libs/libgmx_mpi.lax/libselection.a/compiler.o .libs/libgmx_mpi.lax/libselection.a/evaluate.o .libs/libgmx_mpi.lax/libselection.a/mempool.o .libs/libgmx_mpi.lax/libselection.a/params.o .libs/libgmx_mpi.lax/libselection.a/parser.o .libs/libgmx_mpi.lax/libselection.a/parsetree.o .libs/libgmx_mpi.lax/libselection.a/scanner.o .libs/libgmx_mpi.lax/libselection.a/scanner_internal.o .libs/libgmx_mpi.lax/libselection.a/selection.o .libs/libgmx_mpi.lax/libselection.a/selelem.o .libs/libgmx_mpi.lax/libselection.a/selhelp.o .libs/libgmx_mpi.lax/libselection.a/selmethod.o .libs/libgmx_mpi.lax/libselection.a/selvalue.o .libs/libgmx_mpi.lax/libselection.a/sm_compare.o .libs/libgmx_mpi.lax/libselection.a/sm_distance.o .libs/libgmx_mpi.lax/libselection.a/sm_insolidangle.o .libs/libgmx_mpi.lax/libselection.a/sm_keywords.o .libs/libgmx_mpi.lax/libselection.a/sm_merge.o .libs/libgmx_mpi.lax/libselection.a/sm_permute.o .libs/libgmx_mpi.lax/libselection.a/sm_position.o .libs/libgmx_mpi.lax/libselection.a/sm_same.o .libs/libgmx_mpi.lax/libselection.a/sm_simple.o .libs/libgmx_mpi.lax/libselection.a/symrec.o  .libs/libgmx_mpi.lax/libstatistics.a/gmx_statistics.o .libs/libgmx_mpi.lax/libstatistics.a/histogram.o  .libs/libgmx_mpi.lax/libtrajana.a/centerofmass.o .libs/libgmx_mpi.lax/libtrajana.a/displacement.o .libs/libgmx_mpi.lax/libtrajana.a/indexutil.o .libs/libgmx_mpi.lax/libtrajana.a/nbsearch.o .libs/libgmx_mpi.lax/libtrajana.a/poscalc.o .libs/libgmx_mpi.lax/libtrajana.a/position.o .libs/libgmx_mpi.lax/libtrajana.a/trajana.o   -ldl -lm  -msse2 -framework Accelerate -install_name  /usr/local/gromacs/lib/libgmx_mpi.6.dylib -compatibility_version 7 -current_version 7.0
(cd .libs && rm -f libgmx_mpi.dylib && ln -s libgmx_mpi.6.dylib libgmx_mpi.dylib)
(cd .libs && rm -f libgmx_mpi.6.0.0.dylib && ln -s libgmx_mpi.6.dylib libgmx_mpi.6.0.0.dylib)
rm -fr .libs/libgmx_mpi.lax
mkdir .libs/libgmx_mpi.lax
rm -fr .libs/libgmx_mpi.lax/lt1-libnonbonded.a
mkdir .libs/libgmx_mpi.lax/lt1-libnonbonded.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/.libs/libnonbonded.a
(cd .libs/libgmx_mpi.lax/lt1-libnonbonded.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/nonbonded/.libs/libnonbonded.a)
rm -fr .libs/libgmx_mpi.lax/lt2-libselection.a
mkdir .libs/libgmx_mpi.lax/lt2-libselection.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/selection/.libs/libselection.a
(cd .libs/libgmx_mpi.lax/lt2-libselection.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/selection/.libs/libselection.a)
rm -fr .libs/libgmx_mpi.lax/lt3-libstatistics.a
mkdir .libs/libgmx_mpi.lax/lt3-libstatistics.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/statistics/.libs/libstatistics.a
(cd .libs/libgmx_mpi.lax/lt3-libstatistics.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/statistics/.libs/libstatistics.a)
rm -fr .libs/libgmx_mpi.lax/lt4-libtrajana.a
mkdir .libs/libgmx_mpi.lax/lt4-libtrajana.a
Extracting /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/trajana/.libs/libtrajana.a
(cd .libs/libgmx_mpi.lax/lt4-libtrajana.a && ar x /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/trajana/.libs/libtrajana.a)
ar cru .libs/libgmx_mpi.a  3dview.o atomprop.o bondfree.o calcgrid.o calch.o chargegroup.o checkpoint.o confio.o copyrite.o disre.o do_fit.o enxio.o ewald_util.o ffscanf.o filenm.o futil.o gbutil.o gmx_fatal.o gmx_sort.o gmxcpp.o gmxfio.o ifunc.o index.o inputrec.o cinvsqrtdata.o invblock.o macros.o orires.o sparsematrix.o main.o maths.o matio.o mshift.o mtop_util.o mtxio.o mvdata.o names.o network.o nrama.o nrjac.o nrnb.o pargs.o pbc.o pdbio.o princ.o rando.o random.o gmx_random.o rbin.o readinp.o replace.o rmpbc.o shift_util.o sortwater.o smalloc.o statutil.o sfactor.o strdb.o string2.o symtab.o topsort.o tpxio.o trnio.o trxio.o txtdump.o typedefs.o viewit.o warninp.o wgms.o wman.o writeps.o xdrd.o xtcio.o xvgr.o libxdrf.o gmx_arpack.o gmx_matrix.o dihres.o tcontrol.o splitter.o gmx_cyclecounter.o gmx_system_xdr.o md5.o vmdio.o vmddlopen.o sighandler.o oenv.o gmxfio_rw.o gmxfio_asc.o gmxfio_bin.o gmxfio_xdr.o  .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_free_energy.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_generic.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_generic_cg.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel010.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel010_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel020.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel030.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel030_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel100.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel100_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel101.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel101_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel102.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel102_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel103.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel103_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel104.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel104_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel110.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel110_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel111.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel111_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel112.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel112_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel113.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel113_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel114.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel114_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel120.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel121.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel122.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel123.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel124.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel130.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel130_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel131.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel131_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel132.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel132_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel133.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel133_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel134.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel134_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel200.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel200_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel201.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel201_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel202.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel202_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel203.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel203_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel204.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel204_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel210.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel210_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel211.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel211_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel212.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel212_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel213.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel213_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel214.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel214_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel220.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel221.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel222.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel223.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel224.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel230.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel230_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel231.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel231_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel232.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel232_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel233.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel233_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel234.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel234_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel300.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel300_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel301.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel301_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel302.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel302_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel303.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel303_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel304.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel304_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel310.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel310_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel311.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel311_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel312.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel312_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel313.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel313_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel314.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel314_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel320.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel321.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel322.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel323.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel324.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel330.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel330_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel331.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel331_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel332.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel332_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel333.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel333_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel334.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel334_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel400.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel400_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel410.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel410_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel420.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel430.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel430_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_allvsall.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_allvsall_sse2_single.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_allvsallgb.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_allvsallgb_sse2_single.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_c.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_x86_64_sse.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nb_kernel_x86_64_sse_test_asm.o .libs/libgmx_mpi.lax/lt1-libnonbonded.a/nonbonded.o  .libs/libgmx_mpi.lax/lt2-libselection.a/compiler.o .libs/libgmx_mpi.lax/lt2-libselection.a/evaluate.o .libs/libgmx_mpi.lax/lt2-libselection.a/mempool.o .libs/libgmx_mpi.lax/lt2-libselection.a/params.o .libs/libgmx_mpi.lax/lt2-libselection.a/parser.o .libs/libgmx_mpi.lax/lt2-libselection.a/parsetree.o .libs/libgmx_mpi.lax/lt2-libselection.a/scanner.o .libs/libgmx_mpi.lax/lt2-libselection.a/scanner_internal.o .libs/libgmx_mpi.lax/lt2-libselection.a/selection.o .libs/libgmx_mpi.lax/lt2-libselection.a/selelem.o .libs/libgmx_mpi.lax/lt2-libselection.a/selhelp.o .libs/libgmx_mpi.lax/lt2-libselection.a/selmethod.o .libs/libgmx_mpi.lax/lt2-libselection.a/selvalue.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_compare.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_distance.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_insolidangle.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_keywords.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_merge.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_permute.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_position.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_same.o .libs/libgmx_mpi.lax/lt2-libselection.a/sm_simple.o .libs/libgmx_mpi.lax/lt2-libselection.a/symrec.o  .libs/libgmx_mpi.lax/lt3-libstatistics.a/gmx_statistics.o .libs/libgmx_mpi.lax/lt3-libstatistics.a/histogram.o  .libs/libgmx_mpi.lax/lt4-libtrajana.a/centerofmass.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/displacement.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/indexutil.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/nbsearch.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/poscalc.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/position.o .libs/libgmx_mpi.lax/lt4-libtrajana.a/trajana.o 
ranlib .libs/libgmx_mpi.a
rm -fr .libs/libgmx_mpi.lax .libs/libgmx_mpi.lax
creating libgmx_mpi.la
(cd .libs && rm -f libgmx_mpi.la && ln -s ../libgmx_mpi.la libgmx_mpi.la)
Making all in mdlib
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcmu.lo -MD -MP -MF .deps/calcmu.Tpo -c -o calcmu.lo calcmu.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcmu.lo -MD -MP -MF .deps/calcmu.Tpo -c calcmu.c  -fno-common -DPIC -o .libs/calcmu.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcmu.lo -MD -MP -MF .deps/calcmu.Tpo -c calcmu.c -o calcmu.o >/dev/null 2>&1
mv -f .deps/calcmu.Tpo .deps/calcmu.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcvir.lo -MD -MP -MF .deps/calcvir.Tpo -c -o calcvir.lo calcvir.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcvir.lo -MD -MP -MF .deps/calcvir.Tpo -c calcvir.c  -fno-common -DPIC -o .libs/calcvir.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT calcvir.lo -MD -MP -MF .deps/calcvir.Tpo -c calcvir.c -o calcvir.o >/dev/null 2>&1
mv -f .deps/calcvir.Tpo .deps/calcvir.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT constr.lo -MD -MP -MF .deps/constr.Tpo -c -o constr.lo constr.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT constr.lo -MD -MP -MF .deps/constr.Tpo -c constr.c  -fno-common -DPIC -o .libs/constr.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT constr.lo -MD -MP -MF .deps/constr.Tpo -c constr.c -o constr.o >/dev/null 2>&1
mv -f .deps/constr.Tpo .deps/constr.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT coupling.lo -MD -MP -MF .deps/coupling.Tpo -c -o coupling.lo coupling.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT coupling.lo -MD -MP -MF .deps/coupling.Tpo -c coupling.c  -fno-common -DPIC -o .libs/coupling.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT coupling.lo -MD -MP -MF .deps/coupling.Tpo -c coupling.c -o coupling.o >/dev/null 2>&1
mv -f .deps/coupling.Tpo .deps/coupling.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec.lo -MD -MP -MF .deps/domdec.Tpo -c -o domdec.lo domdec.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec.lo -MD -MP -MF .deps/domdec.Tpo -c domdec.c  -fno-common -DPIC -o .libs/domdec.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec.lo -MD -MP -MF .deps/domdec.Tpo -c domdec.c -o domdec.o >/dev/null 2>&1
mv -f .deps/domdec.Tpo .deps/domdec.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_box.lo -MD -MP -MF .deps/domdec_box.Tpo -c -o domdec_box.lo domdec_box.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_box.lo -MD -MP -MF .deps/domdec_box.Tpo -c domdec_box.c  -fno-common -DPIC -o .libs/domdec_box.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_box.lo -MD -MP -MF .deps/domdec_box.Tpo -c domdec_box.c -o domdec_box.o >/dev/null 2>&1
mv -f .deps/domdec_box.Tpo .deps/domdec_box.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_con.lo -MD -MP -MF .deps/domdec_con.Tpo -c -o domdec_con.lo domdec_con.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_con.lo -MD -MP -MF .deps/domdec_con.Tpo -c domdec_con.c  -fno-common -DPIC -o .libs/domdec_con.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_con.lo -MD -MP -MF .deps/domdec_con.Tpo -c domdec_con.c -o domdec_con.o >/dev/null 2>&1
mv -f .deps/domdec_con.Tpo .deps/domdec_con.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_network.lo -MD -MP -MF .deps/domdec_network.Tpo -c -o domdec_network.lo domdec_network.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_network.lo -MD -MP -MF .deps/domdec_network.Tpo -c domdec_network.c  -fno-common -DPIC -o .libs/domdec_network.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_network.lo -MD -MP -MF .deps/domdec_network.Tpo -c domdec_network.c -o domdec_network.o >/dev/null 2>&1
mv -f .deps/domdec_network.Tpo .deps/domdec_network.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_setup.lo -MD -MP -MF .deps/domdec_setup.Tpo -c -o domdec_setup.lo domdec_setup.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_setup.lo -MD -MP -MF .deps/domdec_setup.Tpo -c domdec_setup.c  -fno-common -DPIC -o .libs/domdec_setup.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_setup.lo -MD -MP -MF .deps/domdec_setup.Tpo -c domdec_setup.c -o domdec_setup.o >/dev/null 2>&1
mv -f .deps/domdec_setup.Tpo .deps/domdec_setup.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_top.lo -MD -MP -MF .deps/domdec_top.Tpo -c -o domdec_top.lo domdec_top.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_top.lo -MD -MP -MF .deps/domdec_top.Tpo -c domdec_top.c  -fno-common -DPIC -o .libs/domdec_top.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT domdec_top.lo -MD -MP -MF .deps/domdec_top.Tpo -c domdec_top.c -o domdec_top.o >/dev/null 2>&1
mv -f .deps/domdec_top.Tpo .deps/domdec_top.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ebin.lo -MD -MP -MF .deps/ebin.Tpo -c -o ebin.lo ebin.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ebin.lo -MD -MP -MF .deps/ebin.Tpo -c ebin.c  -fno-common -DPIC -o .libs/ebin.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ebin.lo -MD -MP -MF .deps/ebin.Tpo -c ebin.c -o ebin.o >/dev/null 2>&1
mv -f .deps/ebin.Tpo .deps/ebin.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT edsam.lo -MD -MP -MF .deps/edsam.Tpo -c -o edsam.lo edsam.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT edsam.lo -MD -MP -MF .deps/edsam.Tpo -c edsam.c  -fno-common -DPIC -o .libs/edsam.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT edsam.lo -MD -MP -MF .deps/edsam.Tpo -c edsam.c -o edsam.o >/dev/null 2>&1
mv -f .deps/edsam.Tpo .deps/edsam.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ewald.lo -MD -MP -MF .deps/ewald.Tpo -c -o ewald.lo ewald.c
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/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_gamess.lo -MD -MP -MF .deps/qm_gamess.Tpo -c -o qm_gamess.lo qm_gamess.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_gamess.lo -MD -MP -MF .deps/qm_gamess.Tpo -c qm_gamess.c  -fno-common -DPIC -o .libs/qm_gamess.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_gamess.lo -MD -MP -MF .deps/qm_gamess.Tpo -c qm_gamess.c -o qm_gamess.o >/dev/null 2>&1
mv -f .deps/qm_gamess.Tpo .deps/qm_gamess.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw2.lo -MD -MP -MF .deps/gmx_fft_fftw2.Tpo -c -o gmx_fft_fftw2.lo gmx_fft_fftw2.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw2.lo -MD -MP -MF .deps/gmx_fft_fftw2.Tpo -c gmx_fft_fftw2.c  -fno-common -DPIC -o .libs/gmx_fft_fftw2.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw2.lo -MD -MP -MF .deps/gmx_fft_fftw2.Tpo -c gmx_fft_fftw2.c -o gmx_fft_fftw2.o >/dev/null 2>&1
mv -f .deps/gmx_fft_fftw2.Tpo .deps/gmx_fft_fftw2.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw3.lo -MD -MP -MF .deps/gmx_fft_fftw3.Tpo -c -o gmx_fft_fftw3.lo gmx_fft_fftw3.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw3.lo -MD -MP -MF .deps/gmx_fft_fftw3.Tpo -c gmx_fft_fftw3.c  -fno-common -DPIC -o .libs/gmx_fft_fftw3.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftw3.lo -MD -MP -MF .deps/gmx_fft_fftw3.Tpo -c gmx_fft_fftw3.c -o gmx_fft_fftw3.o >/dev/null 2>&1
mv -f .deps/gmx_fft_fftw3.Tpo .deps/gmx_fft_fftw3.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftpack.lo -MD -MP -MF .deps/gmx_fft_fftpack.Tpo -c -o gmx_fft_fftpack.lo gmx_fft_fftpack.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftpack.lo -MD -MP -MF .deps/gmx_fft_fftpack.Tpo -c gmx_fft_fftpack.c  -fno-common -DPIC -o .libs/gmx_fft_fftpack.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_fftpack.lo -MD -MP -MF .deps/gmx_fft_fftpack.Tpo -c gmx_fft_fftpack.c -o gmx_fft_fftpack.o >/dev/null 2>&1
mv -f .deps/gmx_fft_fftpack.Tpo .deps/gmx_fft_fftpack.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_mkl.lo -MD -MP -MF .deps/gmx_fft_mkl.Tpo -c -o gmx_fft_mkl.lo gmx_fft_mkl.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_mkl.lo -MD -MP -MF .deps/gmx_fft_mkl.Tpo -c gmx_fft_mkl.c  -fno-common -DPIC -o .libs/gmx_fft_mkl.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_fft_mkl.lo -MD -MP -MF .deps/gmx_fft_mkl.Tpo -c gmx_fft_mkl.c -o gmx_fft_mkl.o >/dev/null 2>&1
mv -f .deps/gmx_fft_mkl.Tpo .deps/gmx_fft_mkl.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_orca.lo -MD -MP -MF .deps/qm_orca.Tpo -c -o qm_orca.lo qm_orca.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_orca.lo -MD -MP -MF .deps/qm_orca.Tpo -c qm_orca.c  -fno-common -DPIC -o .libs/qm_orca.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT qm_orca.lo -MD -MP -MF .deps/qm_orca.Tpo -c qm_orca.c -o qm_orca.o >/dev/null 2>&1
mv -f .deps/qm_orca.Tpo .deps/qm_orca.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mdebin_bar.lo -MD -MP -MF .deps/mdebin_bar.Tpo -c -o mdebin_bar.lo mdebin_bar.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mdebin_bar.lo -MD -MP -MF .deps/mdebin_bar.Tpo -c mdebin_bar.c  -fno-common -DPIC -o .libs/mdebin_bar.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mdebin_bar.lo -MD -MP -MF .deps/mdebin_bar.Tpo -c mdebin_bar.c -o mdebin_bar.o >/dev/null 2>&1
mv -f .deps/mdebin_bar.Tpo .deps/mdebin_bar.Plo
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -no-undefined -version-info 6:0:0 -lfftw3f -lxml2  -framework Accelerate -o libmd_mpi.la -rpath /usr/local/gromacs/lib calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_box.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo force.lo forcerec.lo ghat.lo init.lo iteratedconstraints.lo md_support.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nlistheuristics.lo nsgrid.lo perf_est.lo genborn.lo genborn_sse2_single.lo genborn_sse2_double.lo genborn_allvsall.lo genborn_allvsall_sse2_single.lo genborn_allvsall_sse2_double.lo gmx_qhop_parm.lo gmx_qhop_xml.lo groupcoord.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo tpi.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo fft5d.lo gmx_wallcycle.lo qm_gaussian.lo qm_mopac.lo qm_gamess.lo gmx_fft_fftw2.lo gmx_fft_fftw3.lo gmx_fft_fftpack.lo gmx_fft_mkl.lo qm_orca.lo mdebin_bar.lo ../gmxlib/libgmx_mpi.la	 -lm  
mpicc -dynamiclib  -o .libs/libmd_mpi.6.dylib  .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_box.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/force.o .libs/forcerec.o .libs/ghat.o .libs/init.o .libs/iteratedconstraints.o .libs/md_support.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nlistheuristics.o .libs/nsgrid.o .libs/perf_est.o .libs/genborn.o .libs/genborn_sse2_single.o .libs/genborn_sse2_double.o .libs/genborn_allvsall.o .libs/genborn_allvsall_sse2_single.o .libs/genborn_allvsall_sse2_double.o .libs/gmx_qhop_parm.o .libs/gmx_qhop_xml.o .libs/groupcoord.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/tpi.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/fft5d.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/qm_mopac.o .libs/qm_gamess.o .libs/gmx_fft_fftw2.o .libs/gmx_fft_fftw3.o .libs/gmx_fft_fftpack.o .libs/gmx_fft_mkl.o .libs/qm_orca.o .libs/mdebin_bar.o  -lfftw3f -lxml2 ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -lm  -msse2 -framework Accelerate -install_name  /usr/local/gromacs/lib/libmd_mpi.6.dylib -compatibility_version 7 -current_version 7.0
(cd .libs && rm -f libmd_mpi.dylib && ln -s libmd_mpi.6.dylib libmd_mpi.dylib)
(cd .libs && rm -f libmd_mpi.6.0.0.dylib && ln -s libmd_mpi.6.dylib libmd_mpi.6.0.0.dylib)
ar cru .libs/libmd_mpi.a  calcmu.o calcvir.o constr.o coupling.o domdec.o domdec_box.o domdec_con.o domdec_network.o domdec_setup.o domdec_top.o ebin.o edsam.o ewald.o force.o forcerec.o ghat.o init.o iteratedconstraints.o md_support.o mdatom.o mdebin.o minimize.o mvxvf.o ns.o nlistheuristics.o nsgrid.o perf_est.o genborn.o genborn_sse2_single.o genborn_sse2_double.o genborn_allvsall.o genborn_allvsall_sse2_single.o genborn_allvsall_sse2_double.o gmx_qhop_parm.o gmx_qhop_xml.o groupcoord.o pme.o pme_pp.o pppm.o partdec.o pull.o pullutil.o rf_util.o shakef.o sim_util.o shellfc.o stat.o tables.o tgroup.o tpi.o update.o vcm.o vsite.o wall.o wnblist.o csettle.o clincs.o qmmm.o gmx_fft.o gmx_parallel_3dfft.o fft5d.o gmx_wallcycle.o qm_gaussian.o qm_mopac.o qm_gamess.o gmx_fft_fftw2.o gmx_fft_fftw3.o gmx_fft_fftpack.o gmx_fft_mkl.o qm_orca.o mdebin_bar.o
ranlib .libs/libmd_mpi.a
creating libmd_mpi.la
(cd .libs && rm -f libmd_mpi.la && ln -s ../libmd_mpi.la libmd_mpi.la)
Making all in kernel
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT add_par.lo -MD -MP -MF .deps/add_par.Tpo -c -o add_par.lo add_par.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT add_par.lo -MD -MP -MF .deps/add_par.Tpo -c add_par.c  -fno-common -DPIC -o .libs/add_par.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT add_par.lo -MD -MP -MF .deps/add_par.Tpo -c add_par.c -o add_par.o >/dev/null 2>&1
mv -f .deps/add_par.Tpo .deps/add_par.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compute_io.lo -MD -MP -MF .deps/compute_io.Tpo -c -o compute_io.lo compute_io.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compute_io.lo -MD -MP -MF .deps/compute_io.Tpo -c compute_io.c  -fno-common -DPIC -o .libs/compute_io.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT compute_io.lo -MD -MP -MF .deps/compute_io.Tpo -c compute_io.c -o compute_io.o >/dev/null 2>&1
mv -f .deps/compute_io.Tpo .deps/compute_io.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT convparm.lo -MD -MP -MF .deps/convparm.Tpo -c -o convparm.lo convparm.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT convparm.lo -MD -MP -MF .deps/convparm.Tpo -c convparm.c  -fno-common -DPIC -o .libs/convparm.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT convparm.lo -MD -MP -MF .deps/convparm.Tpo -c convparm.c -o convparm.o >/dev/null 2>&1
mv -f .deps/convparm.Tpo .deps/convparm.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT fflibutil.lo -MD -MP -MF .deps/fflibutil.Tpo -c -o fflibutil.lo fflibutil.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT fflibutil.lo -MD -MP -MF .deps/fflibutil.Tpo -c fflibutil.c  -fno-common -DPIC -o .libs/fflibutil.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT fflibutil.lo -MD -MP -MF .deps/fflibutil.Tpo -c fflibutil.c -o fflibutil.o >/dev/null 2>&1
mv -f .deps/fflibutil.Tpo .deps/fflibutil.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_ad.lo -MD -MP -MF .deps/gen_ad.Tpo -c -o gen_ad.lo gen_ad.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_ad.lo -MD -MP -MF .deps/gen_ad.Tpo -c gen_ad.c  -fno-common -DPIC -o .libs/gen_ad.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_ad.lo -MD -MP -MF .deps/gen_ad.Tpo -c gen_ad.c -o gen_ad.o >/dev/null 2>&1
mv -f .deps/gen_ad.Tpo .deps/gen_ad.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_vsite.lo -MD -MP -MF .deps/gen_vsite.Tpo -c -o gen_vsite.lo gen_vsite.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_vsite.lo -MD -MP -MF .deps/gen_vsite.Tpo -c gen_vsite.c  -fno-common -DPIC -o .libs/gen_vsite.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gen_vsite.lo -MD -MP -MF .deps/gen_vsite.Tpo -c gen_vsite.c -o gen_vsite.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topio.lo -MD -MP -MF .deps/topio.Tpo -c -o topio.lo topio.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topio.lo -MD -MP -MF .deps/topio.Tpo -c topio.c  -fno-common -DPIC -o .libs/topio.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topio.lo -MD -MP -MF .deps/topio.Tpo -c topio.c -o topio.o >/dev/null 2>&1
mv -f .deps/topio.Tpo .deps/topio.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toppush.lo -MD -MP -MF .deps/toppush.Tpo -c -o toppush.lo toppush.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toppush.lo -MD -MP -MF .deps/toppush.Tpo -c toppush.c  -fno-common -DPIC -o .libs/toppush.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toppush.lo -MD -MP -MF .deps/toppush.Tpo -c toppush.c -o toppush.o >/dev/null 2>&1
mv -f .deps/toppush.Tpo .deps/toppush.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topshake.lo -MD -MP -MF .deps/topshake.Tpo -c -o topshake.lo topshake.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topshake.lo -MD -MP -MF .deps/topshake.Tpo -c topshake.c  -fno-common -DPIC -o .libs/topshake.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT topshake.lo -MD -MP -MF .deps/topshake.Tpo -c topshake.c -o topshake.o >/dev/null 2>&1
mv -f .deps/topshake.Tpo .deps/topshake.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toputil.lo -MD -MP -MF .deps/toputil.Tpo -c -o toputil.lo toputil.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toputil.lo -MD -MP -MF .deps/toputil.Tpo -c toputil.c  -fno-common -DPIC -o .libs/toputil.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT toputil.lo -MD -MP -MF .deps/toputil.Tpo -c toputil.c -o toputil.o >/dev/null 2>&1
mv -f .deps/toputil.Tpo .deps/toputil.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT tpbcmp.lo -MD -MP -MF .deps/tpbcmp.Tpo -c -o tpbcmp.lo tpbcmp.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT tpbcmp.lo -MD -MP -MF .deps/tpbcmp.Tpo -c tpbcmp.c  -fno-common -DPIC -o .libs/tpbcmp.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT tpbcmp.lo -MD -MP -MF .deps/tpbcmp.Tpo -c tpbcmp.c -o tpbcmp.o >/dev/null 2>&1
mv -f .deps/tpbcmp.Tpo .deps/tpbcmp.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vsite_parm.lo -MD -MP -MF .deps/vsite_parm.Tpo -c -o vsite_parm.lo vsite_parm.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vsite_parm.lo -MD -MP -MF .deps/vsite_parm.Tpo -c vsite_parm.c  -fno-common -DPIC -o .libs/vsite_parm.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT vsite_parm.lo -MD -MP -MF .deps/vsite_parm.Tpo -c vsite_parm.c -o vsite_parm.o >/dev/null 2>&1
mv -f .deps/vsite_parm.Tpo .deps/vsite_parm.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xlate.lo -MD -MP -MF .deps/xlate.Tpo -c -o xlate.lo xlate.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xlate.lo -MD -MP -MF .deps/xlate.Tpo -c xlate.c  -fno-common -DPIC -o .libs/xlate.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xlate.lo -MD -MP -MF .deps/xlate.Tpo -c xlate.c -o xlate.o >/dev/null 2>&1
mv -f .deps/xlate.Tpo .deps/xlate.Plo
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -no-undefined -version-info 6:0:0  -framework Accelerate -o libgmxpreprocess_mpi.la -rpath /usr/local/gromacs/lib add_par.lo compute_io.lo convparm.lo fflibutil.lo gen_ad.lo gen_vsite.lo genhydro.lo gpp_atomtype.lo gpp_bond_atomtype.lo h_db.lo hackblock.lo hizzie.lo pdb2top.lo pgutil.lo readir.lo readpull.lo resall.lo sorting.lo specbond.lo ter_db.lo tomorse.lo topdirs.lo topexcl.lo topio.lo toppush.lo topshake.lo toputil.lo tpbcmp.lo vsite_parm.lo xlate.lo ../mdlib/libmd_mpi.la -lm  
mpicc -dynamiclib  -o .libs/libgmxpreprocess_mpi.6.dylib  .libs/add_par.o .libs/compute_io.o .libs/convparm.o .libs/fflibutil.o .libs/gen_ad.o .libs/gen_vsite.o .libs/genhydro.o .libs/gpp_atomtype.o .libs/gpp_bond_atomtype.o .libs/h_db.o .libs/hackblock.o .libs/hizzie.o .libs/pdb2top.o .libs/pgutil.o .libs/readir.o .libs/readpull.o .libs/resall.o .libs/sorting.o .libs/specbond.o .libs/ter_db.o .libs/tomorse.o .libs/topdirs.o .libs/topexcl.o .libs/topio.o .libs/toppush.o .libs/topshake.o .libs/toputil.o .libs/tpbcmp.o .libs/vsite_parm.o .libs/xlate.o  ../mdlib/.libs/libmd_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib -lm  -msse2 -framework Accelerate -install_name  /usr/local/gromacs/lib/libgmxpreprocess_mpi.6.dylib -compatibility_version 7 -current_version 7.0
(cd .libs && rm -f libgmxpreprocess_mpi.dylib && ln -s libgmxpreprocess_mpi.6.dylib libgmxpreprocess_mpi.dylib)
(cd .libs && rm -f libgmxpreprocess_mpi.6.0.0.dylib && ln -s libgmxpreprocess_mpi.6.dylib libgmxpreprocess_mpi.6.0.0.dylib)
ar cru .libs/libgmxpreprocess_mpi.a  add_par.o compute_io.o convparm.o fflibutil.o gen_ad.o gen_vsite.o genhydro.o gpp_atomtype.o gpp_bond_atomtype.o h_db.o hackblock.o hizzie.o pdb2top.o pgutil.o readir.o readpull.o resall.o sorting.o specbond.o ter_db.o tomorse.o topdirs.o topexcl.o topio.o toppush.o topshake.o toputil.o tpbcmp.o vsite_parm.o xlate.o
ranlib .libs/libgmxpreprocess_mpi.a
creating libgmxpreprocess_mpi.la
(cd .libs && rm -f libgmxpreprocess_mpi.la && ln -s ../libgmxpreprocess_mpi.la libgmxpreprocess_mpi.la)
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT grompp.o -MD -MP -MF .deps/grompp.Tpo -c -o grompp.o grompp.c
mv -f .deps/grompp.Tpo .deps/grompp.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o grompp grompp.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/grompp grompp.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating grompp
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gctio.o -MD -MP -MF .deps/gctio.Tpo -c -o gctio.o gctio.c
mv -f .deps/gctio.Tpo .deps/gctio.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ionize.o -MD -MP -MF .deps/ionize.Tpo -c -o ionize.o ionize.c
mv -f .deps/ionize.Tpo .deps/ionize.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT do_gct.o -MD -MP -MF .deps/do_gct.Tpo -c -o do_gct.o do_gct.c
mv -f .deps/do_gct.Tpo .deps/do_gct.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT repl_ex.o -MD -MP -MF .deps/repl_ex.Tpo -c -o repl_ex.o repl_ex.c
mv -f .deps/repl_ex.Tpo .deps/repl_ex.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xutils.o -MD -MP -MF .deps/xutils.Tpo -c -o xutils.o xutils.c
mv -f .deps/xutils.Tpo .deps/xutils.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT runner.o -MD -MP -MF .deps/runner.Tpo -c -o runner.o runner.c
mv -f .deps/runner.Tpo .deps/runner.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT md.o -MD -MP -MF .deps/md.Tpo -c -o md.o md.c
mv -f .deps/md.Tpo .deps/md.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mdrun.o -MD -MP -MF .deps/mdrun.Tpo -c -o mdrun.o mdrun.c
mv -f .deps/mdrun.Tpo .deps/mdrun.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT genalg.o -MD -MP -MF .deps/genalg.Tpo -c -o genalg.o genalg.c
mv -f .deps/genalg.Tpo .deps/genalg.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT md_openmm.o -MD -MP -MF .deps/md_openmm.Tpo -c -o md_openmm.o md_openmm.c
mv -f .deps/md_openmm.Tpo .deps/md_openmm.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o mdrun gctio.o ionize.o do_gct.o repl_ex.o xutils.o runner.o md.o mdrun.o genalg.o md_openmm.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/mdrun gctio.o ionize.o do_gct.o repl_ex.o xutils.o runner.o md.o mdrun.o genalg.o md_openmm.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating mdrun
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT tpbconv.o -MD -MP -MF .deps/tpbconv.Tpo -c -o tpbconv.o tpbconv.c
mv -f .deps/tpbconv.Tpo .deps/tpbconv.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o tpbconv tpbconv.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/tpbconv tpbconv.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating tpbconv
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT pdb2gmx.o -MD -MP -MF .deps/pdb2gmx.Tpo -c -o pdb2gmx.o pdb2gmx.c
mv -f .deps/pdb2gmx.Tpo .deps/pdb2gmx.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o pdb2gmx pdb2gmx.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/pdb2gmx pdb2gmx.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating pdb2gmx
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_protonate.o -MD -MP -MF .deps/g_protonate.Tpo -c -o g_protonate.o g_protonate.c
mv -f .deps/g_protonate.Tpo .deps/g_protonate.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_protonate g_protonate.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_protonate g_protonate.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_protonate
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_luck.o -MD -MP -MF .deps/g_luck.Tpo -c -o g_luck.o g_luck.c
mv -f .deps/g_luck.Tpo .deps/g_luck.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_luck g_luck.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_luck g_luck.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_luck
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxdump.o -MD -MP -MF .deps/gmxdump.Tpo -c -o gmxdump.o gmxdump.c
mv -f .deps/gmxdump.Tpo .deps/gmxdump.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o gmxdump gmxdump.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/gmxdump gmxdump.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating gmxdump
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmxcheck.o -MD -MP -MF .deps/gmxcheck.Tpo -c -o gmxcheck.o gmxcheck.c
mv -f .deps/gmxcheck.Tpo .deps/gmxcheck.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o gmxcheck gmxcheck.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/gmxcheck gmxcheck.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating gmxcheck
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_x2top.o -MD -MP -MF .deps/g_x2top.Tpo -c -o g_x2top.o g_x2top.c
mv -f .deps/g_x2top.Tpo .deps/g_x2top.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nm2type.o -MD -MP -MF .deps/nm2type.Tpo -c -o nm2type.o nm2type.c
mv -f .deps/nm2type.Tpo .deps/nm2type.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_x2top g_x2top.o nm2type.o libgmxpreprocess_mpi.la  ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la  -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_x2top g_x2top.o nm2type.o  ./.libs/libgmxpreprocess_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_x2top
Making all in tools
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT geminate.lo -MD -MP -MF .deps/geminate.Tpo -c -o geminate.lo geminate.c
mkdir .libs
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT geminate.lo -MD -MP -MF .deps/geminate.Tpo -c geminate.c  -fno-common -DPIC -o .libs/geminate.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT geminate.lo -MD -MP -MF .deps/geminate.Tpo -c geminate.c -o geminate.o >/dev/null 2>&1
mv -f .deps/geminate.Tpo .deps/geminate.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT autocorr.lo -MD -MP -MF .deps/autocorr.Tpo -c -o autocorr.lo autocorr.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT autocorr.lo -MD -MP -MF .deps/autocorr.Tpo -c autocorr.c  -fno-common -DPIC -o .libs/autocorr.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT autocorr.lo -MD -MP -MF .deps/autocorr.Tpo -c autocorr.c -o autocorr.o >/dev/null 2>&1
mv -f .deps/autocorr.Tpo .deps/autocorr.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT expfit.lo -MD -MP -MF .deps/expfit.Tpo -c -o expfit.lo expfit.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT expfit.lo -MD -MP -MF .deps/expfit.Tpo -c expfit.c  -fno-common -DPIC -o .libs/expfit.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT expfit.lo -MD -MP -MF .deps/expfit.Tpo -c expfit.c -o expfit.o >/dev/null 2>&1
mv -f .deps/expfit.Tpo .deps/expfit.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT polynomials.lo -MD -MP -MF .deps/polynomials.Tpo -c -o polynomials.lo polynomials.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT polynomials.lo -MD -MP -MF .deps/polynomials.Tpo -c polynomials.c  -fno-common -DPIC -o .libs/polynomials.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT polynomials.lo -MD -MP -MF .deps/polynomials.Tpo -c polynomials.c -o polynomials.o >/dev/null 2>&1
mv -f .deps/polynomials.Tpo .deps/polynomials.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT levenmar.lo -MD -MP -MF .deps/levenmar.Tpo -c -o levenmar.lo levenmar.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT levenmar.lo -MD -MP -MF .deps/levenmar.Tpo -c levenmar.c  -fno-common -DPIC -o .libs/levenmar.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT levenmar.lo -MD -MP -MF .deps/levenmar.Tpo -c levenmar.c -o levenmar.o >/dev/null 2>&1
mv -f .deps/levenmar.Tpo .deps/levenmar.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT anadih.lo -MD -MP -MF .deps/anadih.Tpo -c -o anadih.lo anadih.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT anadih.lo -MD -MP -MF .deps/anadih.Tpo -c anadih.c  -fno-common -DPIC -o .libs/anadih.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT anadih.lo -MD -MP -MF .deps/anadih.Tpo -c anadih.c -o anadih.o >/dev/null 2>&1
mv -f .deps/anadih.Tpo .deps/anadih.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT pp2shift.lo -MD -MP -MF .deps/pp2shift.Tpo -c -o pp2shift.lo pp2shift.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT pp2shift.lo -MD -MP -MF .deps/pp2shift.Tpo -c pp2shift.c  -fno-common -DPIC -o .libs/pp2shift.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT pp2shift.lo -MD -MP -MF .deps/pp2shift.Tpo -c pp2shift.c -o pp2shift.o >/dev/null 2>&1
mv -f .deps/pp2shift.Tpo .deps/pp2shift.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dlist.lo -MD -MP -MF .deps/dlist.Tpo -c -o dlist.lo dlist.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dlist.lo -MD -MP -MF .deps/dlist.Tpo -c dlist.c  -fno-common -DPIC -o .libs/dlist.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dlist.lo -MD -MP -MF .deps/dlist.Tpo -c dlist.c -o dlist.o >/dev/null 2>&1
mv -f .deps/dlist.Tpo .deps/dlist.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigio.lo -MD -MP -MF .deps/eigio.Tpo -c -o eigio.lo eigio.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigio.lo -MD -MP -MF .deps/eigio.Tpo -c eigio.c  -fno-common -DPIC -o .libs/eigio.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigio.lo -MD -MP -MF .deps/eigio.Tpo -c eigio.c -o eigio.o >/dev/null 2>&1
mv -f .deps/eigio.Tpo .deps/eigio.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT cmat.lo -MD -MP -MF .deps/cmat.Tpo -c -o cmat.lo cmat.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT cmat.lo -MD -MP -MF .deps/cmat.Tpo -c cmat.c  -fno-common -DPIC -o .libs/cmat.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT cmat.lo -MD -MP -MF .deps/cmat.Tpo -c cmat.c -o cmat.o >/dev/null 2>&1
mv -f .deps/cmat.Tpo .deps/cmat.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigensolver.lo -MD -MP -MF .deps/eigensolver.Tpo -c -o eigensolver.lo eigensolver.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigensolver.lo -MD -MP -MF .deps/eigensolver.Tpo -c eigensolver.c  -fno-common -DPIC -o .libs/eigensolver.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eigensolver.lo -MD -MP -MF .deps/eigensolver.Tpo -c eigensolver.c -o eigensolver.o >/dev/null 2>&1
mv -f .deps/eigensolver.Tpo .deps/eigensolver.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nsc.lo -MD -MP -MF .deps/nsc.Tpo -c -o nsc.lo nsc.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nsc.lo -MD -MP -MF .deps/nsc.Tpo -c nsc.c  -fno-common -DPIC -o .libs/nsc.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nsc.lo -MD -MP -MF .deps/nsc.Tpo -c nsc.c -o nsc.o >/dev/null 2>&1
mv -f .deps/nsc.Tpo .deps/nsc.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT hxprops.lo -MD -MP -MF .deps/hxprops.Tpo -c -o hxprops.lo hxprops.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT hxprops.lo -MD -MP -MF .deps/hxprops.Tpo -c hxprops.c  -fno-common -DPIC -o .libs/hxprops.o
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/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dens_filter.lo -MD -MP -MF .deps/dens_filter.Tpo -c -o dens_filter.lo dens_filter.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dens_filter.lo -MD -MP -MF .deps/dens_filter.Tpo -c dens_filter.c  -fno-common -DPIC -o .libs/dens_filter.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dens_filter.lo -MD -MP -MF .deps/dens_filter.Tpo -c dens_filter.c -o dens_filter.o >/dev/null 2>&1
mv -f .deps/dens_filter.Tpo .deps/dens_filter.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT powerspect.lo -MD -MP -MF .deps/powerspect.Tpo -c -o powerspect.lo powerspect.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT powerspect.lo -MD -MP -MF .deps/powerspect.Tpo -c powerspect.c  -fno-common -DPIC -o .libs/powerspect.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT powerspect.lo -MD -MP -MF .deps/powerspect.Tpo -c powerspect.c -o powerspect.o >/dev/null 2>&1
mv -f .deps/powerspect.Tpo .deps/powerspect.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_densorder.lo -MD -MP -MF .deps/gmx_densorder.Tpo -c -o gmx_densorder.lo gmx_densorder.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_densorder.lo -MD -MP -MF .deps/gmx_densorder.Tpo -c gmx_densorder.c  -fno-common -DPIC -o .libs/gmx_densorder.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_densorder.lo -MD -MP -MF .deps/gmx_densorder.Tpo -c gmx_densorder.c -o gmx_densorder.o >/dev/null 2>&1
mv -f .deps/gmx_densorder.Tpo .deps/gmx_densorder.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_hydorder.lo -MD -MP -MF .deps/gmx_hydorder.Tpo -c -o gmx_hydorder.lo gmx_hydorder.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_hydorder.lo -MD -MP -MF .deps/gmx_hydorder.Tpo -c gmx_hydorder.c  -fno-common -DPIC -o .libs/gmx_hydorder.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT gmx_hydorder.lo -MD -MP -MF .deps/gmx_hydorder.Tpo -c gmx_hydorder.c -o gmx_hydorder.o >/dev/null 2>&1
mv -f .deps/gmx_hydorder.Tpo .deps/gmx_hydorder.Plo
/bin/sh ../../libtool --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT binsearch.lo -MD -MP -MF .deps/binsearch.Tpo -c -o binsearch.lo binsearch.c
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT binsearch.lo -MD -MP -MF .deps/binsearch.Tpo -c binsearch.c  -fno-common -DPIC -o .libs/binsearch.o
 mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT binsearch.lo -MD -MP -MF .deps/binsearch.Tpo -c binsearch.c -o binsearch.o >/dev/null 2>&1
mv -f .deps/binsearch.Tpo .deps/binsearch.Plo
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -no-undefined -version-info 6:0:0  -framework Accelerate -o libgmxana_mpi.la -rpath /usr/local/gromacs/lib geminate.lo autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_bar.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_dos.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_rotmat.lo gmx_saltbr.lo gmx_sas.lo gmx_select.lo gmx_pme_error.lo gmx_options.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo gmx_tune_pme.lo gmx_membed.lo calcpot.lo edittop.lo dens_filter.lo powerspect.lo gmx_densorder.lo gmx_hydorder.lo binsearch.lo ../gmxlib/libgmx_mpi.la	../mdlib/libmd_mpi.la	 -lm  
mpicc -dynamiclib  -o .libs/libgmxana_mpi.6.dylib  .libs/geminate.o .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_bar.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_dos.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_rotmat.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_select.o .libs/gmx_pme_error.o .libs/gmx_options.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/gmx_tune_pme.o .libs/gmx_membed.o .libs/calcpot.o .libs/edittop.o .libs/dens_filter.o .libs/powerspect.o .libs/gmx_densorder.o .libs/gmx_hydorder.o .libs/binsearch.o  ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib -lm  -msse2 -framework Accelerate -install_name  /usr/local/gromacs/lib/libgmxana_mpi.6.dylib -compatibility_version 7 -current_version 7.0
(cd .libs && rm -f libgmxana_mpi.dylib && ln -s libgmxana_mpi.6.dylib libgmxana_mpi.dylib)
(cd .libs && rm -f libgmxana_mpi.6.0.0.dylib && ln -s libgmxana_mpi.6.dylib libgmxana_mpi.6.0.0.dylib)
ar cru .libs/libgmxana_mpi.a  geminate.o autocorr.o expfit.o polynomials.o levenmar.o anadih.o pp2shift.o dlist.o eigio.o cmat.o eigensolver.o nsc.o hxprops.o fitahx.o gmx_analyze.o gmx_anaeig.o gmx_bar.o gmx_angle.o gmx_bond.o gmx_bundle.o gmx_chi.o gmx_cluster.o gmx_confrms.o gmx_covar.o gmx_current.o gmx_dos.o gmx_density.o gmx_densmap.o gmx_dih.o gmx_dielectric.o gmx_kinetics.o gmx_spatial.o gmx_dipoles.o gmx_disre.o gmx_dist.o gmx_dyndom.o gmx_enemat.o gmx_energy.o gmx_lie.o gmx_filter.o gmx_gyrate.o gmx_h2order.o gmx_hbond.o gmx_helix.o gmx_mindist.o gmx_msd.o gmx_morph.o gmx_nmeig.o gmx_nmens.o gmx_order.o gmx_principal.o gmx_polystat.o gmx_potential.o gmx_rama.o gmx_rdf.o gmx_rms.o gmx_rmsdist.o gmx_rmsf.o gmx_rotacf.o gmx_rotmat.o gmx_saltbr.o gmx_sas.o gmx_select.o gmx_pme_error.o gmx_options.o gmx_sgangle.o gmx_sorient.o gmx_spol.o gmx_tcaf.o gmx_traj.o gmx_velacc.o gmx_helixorient.o gmx_clustsize.o gmx_mdmat.o gmx_wham.o correl.o gmx_sham.o gmx_nmtraj.o gmx_trjconv.o gmx_trjcat.o gmx_trjorder.o gmx_xpm2ps.o gmx_editconf.o gmx_genbox.o gmx_genion.o gmx_genconf.o gmx_genpr.o gmx_eneconv.o gmx_vanhove.o gmx_wheel.o addconf.o gmx_tune_pme.o gmx_membed.o calcpot.o edittop.o dens_filter.o powerspect.o gmx_densorder.o gmx_hydorder.o binsearch.o
ranlib .libs/libgmxana_mpi.a
creating libgmxana_mpi.la
(cd .libs && rm -f libgmxana_mpi.la && ln -s ../libgmxana_mpi.la libgmxana_mpi.la)
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT do_dssp.o -MD -MP -MF .deps/do_dssp.Tpo -c -o do_dssp.o do_dssp.c
mv -f .deps/do_dssp.Tpo .deps/do_dssp.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o do_dssp do_dssp.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/do_dssp do_dssp.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating do_dssp
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT editconf.o -MD -MP -MF .deps/editconf.Tpo -c -o editconf.o editconf.c
mv -f .deps/editconf.Tpo .deps/editconf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o editconf editconf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/editconf editconf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating editconf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT eneconv.o -MD -MP -MF .deps/eneconv.Tpo -c -o eneconv.o eneconv.c
mv -f .deps/eneconv.Tpo .deps/eneconv.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o eneconv eneconv.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/eneconv eneconv.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating eneconv
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT genbox.o -MD -MP -MF .deps/genbox.Tpo -c -o genbox.o genbox.c
mv -f .deps/genbox.Tpo .deps/genbox.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o genbox genbox.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/genbox genbox.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating genbox
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT genconf.o -MD -MP -MF .deps/genconf.Tpo -c -o genconf.o genconf.c
mv -f .deps/genconf.Tpo .deps/genconf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o genconf genconf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/genconf genconf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating genconf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT genrestr.o -MD -MP -MF .deps/genrestr.Tpo -c -o genrestr.o genrestr.c
mv -f .deps/genrestr.Tpo .deps/genrestr.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o genrestr genrestr.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/genrestr genrestr.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating genrestr
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_nmtraj.o -MD -MP -MF .deps/g_nmtraj.Tpo -c -o g_nmtraj.o g_nmtraj.c
mv -f .deps/g_nmtraj.Tpo .deps/g_nmtraj.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_nmtraj g_nmtraj.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_nmtraj g_nmtraj.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_nmtraj
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT make_ndx.o -MD -MP -MF .deps/make_ndx.Tpo -c -o make_ndx.o make_ndx.c
mv -f .deps/make_ndx.Tpo .deps/make_ndx.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o make_ndx make_ndx.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/make_ndx make_ndx.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating make_ndx
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT mk_angndx.o -MD -MP -MF .deps/mk_angndx.Tpo -c -o mk_angndx.o mk_angndx.c
mv -f .deps/mk_angndx.Tpo .deps/mk_angndx.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o mk_angndx mk_angndx.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/mk_angndx mk_angndx.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating mk_angndx
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trjcat.o -MD -MP -MF .deps/trjcat.Tpo -c -o trjcat.o trjcat.c
mv -f .deps/trjcat.Tpo .deps/trjcat.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o trjcat trjcat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/trjcat trjcat.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating trjcat
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trjconv.o -MD -MP -MF .deps/trjconv.Tpo -c -o trjconv.o trjconv.c
mv -f .deps/trjconv.Tpo .deps/trjconv.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o trjconv trjconv.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/trjconv trjconv.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating trjconv
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT trjorder.o -MD -MP -MF .deps/trjorder.Tpo -c -o trjorder.o trjorder.c
mv -f .deps/trjorder.Tpo .deps/trjorder.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o trjorder trjorder.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/trjorder trjorder.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating trjorder
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_wheel.o -MD -MP -MF .deps/g_wheel.Tpo -c -o g_wheel.o g_wheel.c
mv -f .deps/g_wheel.Tpo .deps/g_wheel.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_wheel g_wheel.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_wheel g_wheel.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_wheel
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xpm2ps.o -MD -MP -MF .deps/xpm2ps.Tpo -c -o xpm2ps.o xpm2ps.c
mv -f .deps/xpm2ps.Tpo .deps/xpm2ps.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o xpm2ps xpm2ps.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/xpm2ps xpm2ps.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating xpm2ps
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT genion.o -MD -MP -MF .deps/genion.Tpo -c -o genion.o genion.c
mv -f .deps/genion.Tpo .deps/genion.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o genion genion.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/genion genion.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating genion
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_anadock.o -MD -MP -MF .deps/g_anadock.Tpo -c -o g_anadock.o g_anadock.c
mv -f .deps/g_anadock.Tpo .deps/g_anadock.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_anadock g_anadock.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_anadock g_anadock.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_anadock
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT make_edi.o -MD -MP -MF .deps/make_edi.Tpo -c -o make_edi.o make_edi.c
mv -f .deps/make_edi.Tpo .deps/make_edi.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o make_edi make_edi.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/make_edi make_edi.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating make_edi
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_analyze.o -MD -MP -MF .deps/g_analyze.Tpo -c -o g_analyze.o g_analyze.c
mv -f .deps/g_analyze.Tpo .deps/g_analyze.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_analyze g_analyze.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_analyze g_analyze.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_analyze
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_anaeig.o -MD -MP -MF .deps/g_anaeig.Tpo -c -o g_anaeig.o g_anaeig.c
mv -f .deps/g_anaeig.Tpo .deps/g_anaeig.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_anaeig g_anaeig.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_anaeig g_anaeig.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_anaeig
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_bar.o -MD -MP -MF .deps/g_bar.Tpo -c -o g_bar.o g_bar.c
mv -f .deps/g_bar.Tpo .deps/g_bar.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_bar g_bar.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_bar g_bar.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_bar
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_angle.o -MD -MP -MF .deps/g_angle.Tpo -c -o g_angle.o g_angle.c
mv -f .deps/g_angle.Tpo .deps/g_angle.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_angle g_angle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_angle g_angle.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_angle
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_bond.o -MD -MP -MF .deps/g_bond.Tpo -c -o g_bond.o g_bond.c
mv -f .deps/g_bond.Tpo .deps/g_bond.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_bond g_bond.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_bond g_bond.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_bond
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_bundle.o -MD -MP -MF .deps/g_bundle.Tpo -c -o g_bundle.o g_bundle.c
mv -f .deps/g_bundle.Tpo .deps/g_bundle.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_bundle g_bundle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_bundle g_bundle.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_bundle
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_chi.o -MD -MP -MF .deps/g_chi.Tpo -c -o g_chi.o g_chi.c
mv -f .deps/g_chi.Tpo .deps/g_chi.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_chi g_chi.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_chi g_chi.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_chi
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_cluster.o -MD -MP -MF .deps/g_cluster.Tpo -c -o g_cluster.o g_cluster.c
mv -f .deps/g_cluster.Tpo .deps/g_cluster.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_cluster g_cluster.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_cluster g_cluster.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_cluster
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_confrms.o -MD -MP -MF .deps/g_confrms.Tpo -c -o g_confrms.o g_confrms.c
mv -f .deps/g_confrms.Tpo .deps/g_confrms.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_confrms g_confrms.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_confrms g_confrms.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_confrms
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_covar.o -MD -MP -MF .deps/g_covar.Tpo -c -o g_covar.o g_covar.c
mv -f .deps/g_covar.Tpo .deps/g_covar.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_covar g_covar.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_covar g_covar.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_covar
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_current.o -MD -MP -MF .deps/g_current.Tpo -c -o g_current.o g_current.c
mv -f .deps/g_current.Tpo .deps/g_current.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_current g_current.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_current g_current.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_current
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dos.o -MD -MP -MF .deps/g_dos.Tpo -c -o g_dos.o g_dos.c
mv -f .deps/g_dos.Tpo .deps/g_dos.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dos g_dos.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dos g_dos.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dos
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_density.o -MD -MP -MF .deps/g_density.Tpo -c -o g_density.o g_density.c
mv -f .deps/g_density.Tpo .deps/g_density.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_density g_density.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_density g_density.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_density
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_densmap.o -MD -MP -MF .deps/g_densmap.Tpo -c -o g_densmap.o g_densmap.c
mv -f .deps/g_densmap.Tpo .deps/g_densmap.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_densmap g_densmap.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_densmap g_densmap.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_densmap
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dih.o -MD -MP -MF .deps/g_dih.Tpo -c -o g_dih.o g_dih.c
mv -f .deps/g_dih.Tpo .deps/g_dih.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dih g_dih.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dih g_dih.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dih
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dielectric.o -MD -MP -MF .deps/g_dielectric.Tpo -c -o g_dielectric.o g_dielectric.c
mv -f .deps/g_dielectric.Tpo .deps/g_dielectric.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dielectric g_dielectric.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dielectric g_dielectric.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dielectric
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_helixorient.o -MD -MP -MF .deps/g_helixorient.Tpo -c -o g_helixorient.o g_helixorient.c
mv -f .deps/g_helixorient.Tpo .deps/g_helixorient.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_helixorient g_helixorient.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_helixorient g_helixorient.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_helixorient
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_principal.o -MD -MP -MF .deps/g_principal.Tpo -c -o g_principal.o g_principal.c
mv -f .deps/g_principal.Tpo .deps/g_principal.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_principal g_principal.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_principal g_principal.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_principal
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dipoles.o -MD -MP -MF .deps/g_dipoles.Tpo -c -o g_dipoles.o g_dipoles.c
mv -f .deps/g_dipoles.Tpo .deps/g_dipoles.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dipoles g_dipoles.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dipoles g_dipoles.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dipoles
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_disre.o -MD -MP -MF .deps/g_disre.Tpo -c -o g_disre.o g_disre.c
mv -f .deps/g_disre.Tpo .deps/g_disre.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_disre g_disre.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_disre g_disre.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_disre
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dist.o -MD -MP -MF .deps/g_dist.Tpo -c -o g_dist.o g_dist.c
mv -f .deps/g_dist.Tpo .deps/g_dist.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dist g_dist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dist g_dist.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dist
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_dyndom.o -MD -MP -MF .deps/g_dyndom.Tpo -c -o g_dyndom.o g_dyndom.c
mv -f .deps/g_dyndom.Tpo .deps/g_dyndom.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_dyndom g_dyndom.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_dyndom g_dyndom.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_dyndom
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_enemat.o -MD -MP -MF .deps/g_enemat.Tpo -c -o g_enemat.o g_enemat.c
mv -f .deps/g_enemat.Tpo .deps/g_enemat.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_enemat g_enemat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_enemat g_enemat.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_enemat
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_energy.o -MD -MP -MF .deps/g_energy.Tpo -c -o g_energy.o g_energy.c
mv -f .deps/g_energy.Tpo .deps/g_energy.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_energy g_energy.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_energy g_energy.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_energy
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_lie.o -MD -MP -MF .deps/g_lie.Tpo -c -o g_lie.o g_lie.c
mv -f .deps/g_lie.Tpo .deps/g_lie.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_lie g_lie.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_lie g_lie.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_lie
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_filter.o -MD -MP -MF .deps/g_filter.Tpo -c -o g_filter.o g_filter.c
mv -f .deps/g_filter.Tpo .deps/g_filter.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_filter g_filter.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_filter g_filter.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_filter
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_gyrate.o -MD -MP -MF .deps/g_gyrate.Tpo -c -o g_gyrate.o g_gyrate.c
mv -f .deps/g_gyrate.Tpo .deps/g_gyrate.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_gyrate g_gyrate.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_gyrate g_gyrate.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_gyrate
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_h2order.o -MD -MP -MF .deps/g_h2order.Tpo -c -o g_h2order.o g_h2order.c
mv -f .deps/g_h2order.Tpo .deps/g_h2order.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_h2order g_h2order.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_h2order g_h2order.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_h2order
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_hbond.o -MD -MP -MF .deps/g_hbond.Tpo -c -o g_hbond.o g_hbond.c
mv -f .deps/g_hbond.Tpo .deps/g_hbond.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_hbond g_hbond.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_hbond g_hbond.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_hbond
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_helix.o -MD -MP -MF .deps/g_helix.Tpo -c -o g_helix.o g_helix.c
mv -f .deps/g_helix.Tpo .deps/g_helix.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_helix g_helix.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_helix g_helix.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_helix
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_mindist.o -MD -MP -MF .deps/g_mindist.Tpo -c -o g_mindist.o g_mindist.c
mv -f .deps/g_mindist.Tpo .deps/g_mindist.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_mindist g_mindist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_mindist g_mindist.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_mindist
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_msd.o -MD -MP -MF .deps/g_msd.Tpo -c -o g_msd.o g_msd.c
mv -f .deps/g_msd.Tpo .deps/g_msd.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_msd g_msd.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_msd g_msd.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_msd
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_morph.o -MD -MP -MF .deps/g_morph.Tpo -c -o g_morph.o g_morph.c
mv -f .deps/g_morph.Tpo .deps/g_morph.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_morph g_morph.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_morph g_morph.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_morph
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_nmeig.o -MD -MP -MF .deps/g_nmeig.Tpo -c -o g_nmeig.o g_nmeig.c
mv -f .deps/g_nmeig.Tpo .deps/g_nmeig.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_nmeig g_nmeig.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_nmeig g_nmeig.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_nmeig
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_nmens.o -MD -MP -MF .deps/g_nmens.Tpo -c -o g_nmens.o g_nmens.c
mv -f .deps/g_nmens.Tpo .deps/g_nmens.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_nmens g_nmens.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_nmens g_nmens.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_nmens
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_order.o -MD -MP -MF .deps/g_order.Tpo -c -o g_order.o g_order.c
mv -f .deps/g_order.Tpo .deps/g_order.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_order g_order.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_order g_order.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_order
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_kinetics.o -MD -MP -MF .deps/g_kinetics.Tpo -c -o g_kinetics.o g_kinetics.c
mv -f .deps/g_kinetics.Tpo .deps/g_kinetics.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_kinetics g_kinetics.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_kinetics g_kinetics.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_kinetics
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_polystat.o -MD -MP -MF .deps/g_polystat.Tpo -c -o g_polystat.o g_polystat.c
mv -f .deps/g_polystat.Tpo .deps/g_polystat.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_polystat g_polystat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_polystat g_polystat.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_polystat
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_potential.o -MD -MP -MF .deps/g_potential.Tpo -c -o g_potential.o g_potential.c
mv -f .deps/g_potential.Tpo .deps/g_potential.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_potential g_potential.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_potential g_potential.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_potential
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rama.o -MD -MP -MF .deps/g_rama.Tpo -c -o g_rama.o g_rama.c
mv -f .deps/g_rama.Tpo .deps/g_rama.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rama g_rama.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rama g_rama.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rama
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rdf.o -MD -MP -MF .deps/g_rdf.Tpo -c -o g_rdf.o g_rdf.c
mv -f .deps/g_rdf.Tpo .deps/g_rdf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rdf g_rdf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rdf g_rdf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rdf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rms.o -MD -MP -MF .deps/g_rms.Tpo -c -o g_rms.o g_rms.c
mv -f .deps/g_rms.Tpo .deps/g_rms.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rms g_rms.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rms g_rms.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rms
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rmsdist.o -MD -MP -MF .deps/g_rmsdist.Tpo -c -o g_rmsdist.o g_rmsdist.c
mv -f .deps/g_rmsdist.Tpo .deps/g_rmsdist.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rmsdist g_rmsdist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rmsdist g_rmsdist.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rmsdist
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rmsf.o -MD -MP -MF .deps/g_rmsf.Tpo -c -o g_rmsf.o g_rmsf.c
mv -f .deps/g_rmsf.Tpo .deps/g_rmsf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rmsf g_rmsf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rmsf g_rmsf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rmsf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rotacf.o -MD -MP -MF .deps/g_rotacf.Tpo -c -o g_rotacf.o g_rotacf.c
mv -f .deps/g_rotacf.Tpo .deps/g_rotacf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rotacf g_rotacf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rotacf g_rotacf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rotacf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_rotmat.o -MD -MP -MF .deps/g_rotmat.Tpo -c -o g_rotmat.o g_rotmat.c
mv -f .deps/g_rotmat.Tpo .deps/g_rotmat.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_rotmat g_rotmat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_rotmat g_rotmat.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_rotmat
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_saltbr.o -MD -MP -MF .deps/g_saltbr.Tpo -c -o g_saltbr.o g_saltbr.c
mv -f .deps/g_saltbr.Tpo .deps/g_saltbr.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_saltbr g_saltbr.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_saltbr g_saltbr.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_saltbr
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_sas.o -MD -MP -MF .deps/g_sas.Tpo -c -o g_sas.o g_sas.c
mv -f .deps/g_sas.Tpo .deps/g_sas.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_sas g_sas.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_sas g_sas.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_sas
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_select.o -MD -MP -MF .deps/g_select.Tpo -c -o g_select.o g_select.c
mv -f .deps/g_select.Tpo .deps/g_select.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_select g_select.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_select g_select.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_select
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_sgangle.o -MD -MP -MF .deps/g_sgangle.Tpo -c -o g_sgangle.o g_sgangle.c
mv -f .deps/g_sgangle.Tpo .deps/g_sgangle.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_sgangle g_sgangle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_sgangle g_sgangle.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_sgangle
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_sham.o -MD -MP -MF .deps/g_sham.Tpo -c -o g_sham.o g_sham.c
mv -f .deps/g_sham.Tpo .deps/g_sham.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_sham g_sham.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_sham g_sham.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_sham
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_sorient.o -MD -MP -MF .deps/g_sorient.Tpo -c -o g_sorient.o g_sorient.c
mv -f .deps/g_sorient.Tpo .deps/g_sorient.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_sorient g_sorient.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_sorient g_sorient.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_sorient
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_spol.o -MD -MP -MF .deps/g_spol.Tpo -c -o g_spol.o g_spol.c
mv -f .deps/g_spol.Tpo .deps/g_spol.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_spol g_spol.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_spol g_spol.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_spol
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_spatial.o -MD -MP -MF .deps/g_spatial.Tpo -c -o g_spatial.o g_spatial.c
mv -f .deps/g_spatial.Tpo .deps/g_spatial.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_spatial g_spatial.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_spatial g_spatial.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_spatial
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_pme_error.o -MD -MP -MF .deps/g_pme_error.Tpo -c -o g_pme_error.o g_pme_error.c
mv -f .deps/g_pme_error.Tpo .deps/g_pme_error.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_pme_error g_pme_error.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_pme_error g_pme_error.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_pme_error
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_options.o -MD -MP -MF .deps/g_options.Tpo -c -o g_options.o g_options.c
mv -f .deps/g_options.Tpo .deps/g_options.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_options g_options.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_options g_options.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_options
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_tcaf.o -MD -MP -MF .deps/g_tcaf.Tpo -c -o g_tcaf.o g_tcaf.c
mv -f .deps/g_tcaf.Tpo .deps/g_tcaf.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_tcaf g_tcaf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_tcaf g_tcaf.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_tcaf
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_traj.o -MD -MP -MF .deps/g_traj.Tpo -c -o g_traj.o g_traj.c
mv -f .deps/g_traj.Tpo .deps/g_traj.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_traj g_traj.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_traj g_traj.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_traj
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_tune_pme.o -MD -MP -MF .deps/g_tune_pme.Tpo -c -o g_tune_pme.o g_tune_pme.c
mv -f .deps/g_tune_pme.Tpo .deps/g_tune_pme.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_tune_pme g_tune_pme.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_tune_pme g_tune_pme.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_tune_pme
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_vanhove.o -MD -MP -MF .deps/g_vanhove.Tpo -c -o g_vanhove.o g_vanhove.c
mv -f .deps/g_vanhove.Tpo .deps/g_vanhove.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_vanhove g_vanhove.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_vanhove g_vanhove.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_vanhove
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_velacc.o -MD -MP -MF .deps/g_velacc.Tpo -c -o g_velacc.o g_velacc.c
mv -f .deps/g_velacc.Tpo .deps/g_velacc.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_velacc g_velacc.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_velacc g_velacc.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_velacc
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_membed.o -MD -MP -MF .deps/g_membed.Tpo -c -o g_membed.o g_membed.c
mv -f .deps/g_membed.Tpo .deps/g_membed.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_membed g_membed.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_membed g_membed.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_membed
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_clustsize.o -MD -MP -MF .deps/g_clustsize.Tpo -c -o g_clustsize.o g_clustsize.c
mv -f .deps/g_clustsize.Tpo .deps/g_clustsize.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_clustsize g_clustsize.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_clustsize g_clustsize.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_clustsize
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_mdmat.o -MD -MP -MF .deps/g_mdmat.Tpo -c -o g_mdmat.o g_mdmat.c
mv -f .deps/g_mdmat.Tpo .deps/g_mdmat.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_mdmat g_mdmat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_mdmat g_mdmat.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_mdmat
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_wham.o -MD -MP -MF .deps/g_wham.Tpo -c -o g_wham.o g_wham.c
mv -f .deps/g_wham.Tpo .deps/g_wham.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_wham g_wham.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_wham g_wham.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_wham
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_sigeps.o -MD -MP -MF .deps/g_sigeps.Tpo -c -o g_sigeps.o g_sigeps.c
mv -f .deps/g_sigeps.Tpo .deps/g_sigeps.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_sigeps g_sigeps.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_sigeps g_sigeps.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_sigeps
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_densorder.o -MD -MP -MF .deps/g_densorder.Tpo -c -o g_densorder.o g_densorder.c
mv -f .deps/g_densorder.Tpo .deps/g_densorder.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_densorder g_densorder.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_densorder g_densorder.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_densorder
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_hydorder.o -MD -MP -MF .deps/g_hydorder.Tpo -c -o g_hydorder.o g_hydorder.c
mv -f .deps/g_hydorder.Tpo .deps/g_hydorder.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o g_hydorder g_hydorder.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_hydorder g_hydorder.o  ./.libs/libgmxana_mpi.6.0.0.dylib /Users/damianallis/Desktop/gromacs-4.5.5/src/mdlib/.libs/libmd_mpi.6.0.0.dylib ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_hydorder
Making all in ngmx
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT ngmx.o -MD -MP -MF .deps/ngmx.Tpo -c -o ngmx.o ngmx.c
mv -f .deps/ngmx.Tpo .deps/ngmx.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xutil.o -MD -MP -MF .deps/xutil.Tpo -c -o xutil.o xutil.c
mv -f .deps/xutil.Tpo .deps/xutil.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xmb.o -MD -MP -MF .deps/xmb.Tpo -c -o xmb.o xmb.c
mv -f .deps/xmb.Tpo .deps/xmb.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT x11.o -MD -MP -MF .deps/x11.Tpo -c -o x11.o x11.c
mv -f .deps/x11.Tpo .deps/x11.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xdlghi.o -MD -MP -MF .deps/xdlghi.Tpo -c -o xdlghi.o xdlghi.c
mv -f .deps/xdlghi.Tpo .deps/xdlghi.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT fgrid.o -MD -MP -MF .deps/fgrid.Tpo -c -o fgrid.o fgrid.c
mv -f .deps/fgrid.Tpo .deps/fgrid.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xdlgitem.o -MD -MP -MF .deps/xdlgitem.Tpo -c -o xdlgitem.o xdlgitem.c
mv -f .deps/xdlgitem.Tpo .deps/xdlgitem.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT popup.o -MD -MP -MF .deps/popup.Tpo -c -o popup.o popup.c
mv -f .deps/popup.Tpo .deps/popup.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT pulldown.o -MD -MP -MF .deps/pulldown.Tpo -c -o pulldown.o pulldown.c
mv -f .deps/pulldown.Tpo .deps/pulldown.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT xdlg.o -MD -MP -MF .deps/xdlg.Tpo -c -o xdlg.o xdlg.c
mv -f .deps/xdlg.Tpo .deps/xdlg.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT manager.o -MD -MP -MF .deps/manager.Tpo -c -o manager.o manager.c
mv -f .deps/manager.Tpo .deps/manager.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT buttons.o -MD -MP -MF .deps/buttons.Tpo -c -o buttons.o buttons.c
mv -f .deps/buttons.Tpo .deps/buttons.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nmol.o -MD -MP -MF .deps/nmol.Tpo -c -o nmol.o nmol.c
mv -f .deps/nmol.Tpo .deps/nmol.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT nleg.o -MD -MP -MF .deps/nleg.Tpo -c -o nleg.o nleg.c
mv -f .deps/nleg.Tpo .deps/nleg.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT dialogs.o -MD -MP -MF .deps/dialogs.Tpo -c -o dialogs.o dialogs.c
mv -f .deps/dialogs.Tpo .deps/dialogs.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT logo.o -MD -MP -MF .deps/logo.Tpo -c -o logo.o logo.c
mv -f .deps/logo.Tpo .deps/logo.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT filter.o -MD -MP -MF .deps/filter.Tpo -c -o filter.o filter.c
mv -f .deps/filter.Tpo .deps/filter.Po
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT molps.o -MD -MP -MF .deps/molps.Tpo -c -o molps.o molps.c
mv -f .deps/molps.Tpo .deps/molps.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -L/usr/X11/lib -R/usr/X11/lib -lSM -lICE -lX11  -framework Accelerate -o ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mkdir .libs
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o  -L/usr/X11/lib -lSM -lICE -lX11 ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating ngmx
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -I/usr/X11/include   -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT g_xrama.o -MD -MP -MF .deps/g_xrama.Tpo -c -o g_xrama.o g_xrama.c
mv -f .deps/g_xrama.Tpo .deps/g_xrama.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -L/usr/X11/lib -R/usr/X11/lib -lSM -lICE -lX11  -framework Accelerate -o g_xrama g_xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lm  
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/g_xrama g_xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o  -L/usr/X11/lib -lSM -lICE -lX11 ../mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating g_xrama
Making all in contrib
make[3]: Nothing to be done for `all'.
make[3]: Nothing to be done for `all-am'.
Making all in admin
make[1]: Nothing to be done for `all'.
Making all in scripts
cat ./GMXRC.in | sed 's,@bindir\@,/usr/local/gromacs/bin,' > GMXRC
cat ./GMXRC.csh.in | sed 's,@libdir\@,/usr/local/gromacs/lib,' | \
	sed 's,@bindir\@,/usr/local/gromacs/bin,' | \
	sed 's,@datadir\@,/usr/local/gromacs/share,' | \
	sed 's,@mandir\@,/usr/local/gromacs/share/man,'  > GMXRC.csh
cat ./GMXRC.bash.in | sed 's,@libdir\@,/usr/local/gromacs/lib,' | \
	sed 's,@bindir\@,/usr/local/gromacs/bin,' | \
	sed 's,@datadir\@,/usr/local/gromacs/share,' | \
	sed 's,@mandir\@,/usr/local/gromacs/share/man,'  > GMXRC.bash
cat ./GMXRC.zsh.in | sed 's,@libdir\@,/usr/local/gromacs/lib,' | \
	sed 's,@bindir\@,/usr/local/gromacs/bin,' | \
	sed 's,@datadir\@,/usr/local/gromacs/share,' | \
	sed 's,@mandir\@,/usr/local/gromacs/share/man,'  > GMXRC.zsh
Making all in share
Making all in top
Making all in encads.ff
make[3]: Nothing to be done for `all'.
Making all in encadv.ff
make[3]: Nothing to be done for `all'.
Making all in gmx.ff
make[3]: Nothing to be done for `all'.
Making all in gmx2.ff
make[3]: Nothing to be done for `all'.
Making all in gromos43a1.ff
make[3]: Nothing to be done for `all'.
Making all in gromos43a2.ff
make[3]: Nothing to be done for `all'.
Making all in gromos45a3.ff
make[3]: Nothing to be done for `all'.
Making all in gromos53a5.ff
make[3]: Nothing to be done for `all'.
Making all in gromos53a6.ff
make[3]: Nothing to be done for `all'.
Making all in oplsaa.ff
make[3]: Nothing to be done for `all'.
Making all in charmm27.ff
make[3]: Nothing to be done for `all'.
Making all in amber94.ff
make[3]: Nothing to be done for `all'.
Making all in amber96.ff
make[3]: Nothing to be done for `all'.
Making all in amberGS.ff
make[3]: Nothing to be done for `all'.
Making all in amber99.ff
make[3]: Nothing to be done for `all'.
Making all in amber99sb.ff
make[3]: Nothing to be done for `all'.
Making all in amber99sb-ildn.ff
make[3]: Nothing to be done for `all'.
Making all in amber03.ff
make[3]: Nothing to be done for `all'.
make[3]: Nothing to be done for `all-am'.
Making all in tutor
Making all in nmr1
make[3]: Nothing to be done for `all'.
Making all in nmr2
make[3]: Nothing to be done for `all'.
Making all in speptide
make[3]: Nothing to be done for `all'.
Making all in water
make[3]: Nothing to be done for `all'.
Making all in gmxdemo
make[3]: Nothing to be done for `all'.
Making all in methanol
make[3]: Nothing to be done for `all'.
Making all in mixed
make[3]: Nothing to be done for `all'.
make[3]: Nothing to be done for `all-am'.
Making all in template
ln -s ../../include gromacs
make  all-am
mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2    -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -MT template.o -MD -MP -MF .deps/template.Tpo -c -o template.o template.c
mv -f .deps/template.Tpo .deps/template.Po
/bin/sh ../../libtool --tag=CC   --mode=link mpicc  -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -framework Accelerate -o template template.o ../../src/mdlib/libmd_mpi.la ../../src/gmxlib/libgmx_mpi.la -lm  
mkdir .libs
mpicc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -framework Accelerate -o .libs/template template.o  ../../src/mdlib/.libs/libmd_mpi.6.0.0.dylib -lfftw3f -lxml2 /Users/damianallis/Desktop/gromacs-4.5.5/src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib ../../src/gmxlib/.libs/libgmx_mpi.6.0.0.dylib -ldl -lm 
creating template
cat ./Template.mak | \
	sed 's,@LDFLAGS\@,-L/usr/local/gromacs/lib   -framework Accelerate,' | \
	sed 's,@LIBS\@,-lmd_mpi -lgmx_mpi -lfftw3f -lxml2  -lm   ,' | \
	sed 's,@CFLAGS\@,-O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99  -I/usr/include/libxml2 -I/usr/local/gromacs/include,' | \
	sed 's,@CC\@,mpicc,' | \
	sed 's,@host\@,x86_64-apple-darwin12.1.0,' >Makefile.x86_64-apple-darwin12.1.0
Making all in html
Making all in .
make[3]: Nothing to be done for `all-am'.
Making all in images
make[3]: Nothing to be done for `all'.
Making all in online
make[3]: Nothing to be done for `all'.
make[2]: Nothing to be done for `all-am'.
Making all in man
Making all in man1
make[2]: Nothing to be done for `all'.
Making all in man7
make[2]: Nothing to be done for `all'.
make[2]: Nothing to be done for `all-am'.
make[1]: Nothing to be done for `all-am'.